RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TLK2Q86UE8 772 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 FAM228AQ86W67 206 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 MAP4K3Q8IVH8 894 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 ARRDC4Q8NCT1 418 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SPATA18Q8TC71 538 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CCDC124Q96CT7 223 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SHCBP1LQ9BZQ2 653 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CASS4Q9NQ75 786 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 LSM7Q9UK45 103 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 NAALADL1Q9UQQ1 740 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 PCDHB2Q9Y5E7 798 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 UBIAD1Q9Y5Z9 338 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 LY75O60449 1722 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CYB561D2O14569 222 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 EPB42P16452 691 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 RASSF2P50749 326 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PREPLQ4J6C6 727 aaPredicted RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CTXN3Q4LDR2 81 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 GPC2Q8N158 579 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 WDR48Q8TAF3 677 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CLEC4DQ8WXI8 215 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 GAD1Q99259 594 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PITPNM3Q9BZ71 974 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 MRPL46Q9H2W6 279 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CERS4Q9HA82 394 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 METTL5Q9NRN9 209 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 DPP3Q9NY33 737 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 GPRC5DQ9NZD1 345 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 IP6K2Q9UHH9 426 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 SLC4A7Q9Y6M7 1214 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 ZNF536O15090 1300 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 MROH7Q68CQ1 1323 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 H3BRJ5 948 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 FAM200BP0CF97 657 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 STAG3L1P0CL83 205 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 GFAPP14136 432 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 GCLCP48506 637 aaPredicted RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PDE1CQ14123 709 aaPredicted RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 ATP13A4Q4VNC1 1196 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 MFSD5Q6N075 450 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 KLC3Q6P597 504 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 VSTM1Q6UX27 236 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PRR23CQ6ZRP0 262 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PRCCQ92733 491 aaPredicted RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 ZBTB10Q96DT7 871 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 STAMBPL1Q96FJ0 436 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PXMP2Q9NR77 195 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 GEMIN8Q9NWZ8 242 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 SYNPO2Q9UMS6 1093 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 TRIM33Q9UPN9 1127 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 ZNF318Q5VUA4 2279 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CDH16O75309 829 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CFHP08603 1231 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 ZSCAN5DPP0CG00 497 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PTPRAP18433 802 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 TAF6P49848 677 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 PAPOLAP51003 745 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 MAP3K7CLP57077 242 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 TAS2R40P59535 323 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 ART3Q13508 389 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 DDX39BQ13838 428 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 IMPG1Q17R60 797 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 MDH1BQ5I0G3 518 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 TFAP2DQ7Z6R9 452 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 RBM23Q86U06 439 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 C4orf33Q8N1A6 199 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CEP120Q8N960 986 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 SHCBP1Q8NEM2 672 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 DDX1Q92499 740 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 NCLNQ969V3 563 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 LRGUKQ96M69 825 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 TMEM109Q9BVC6 243 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 CHMP2BQ9UQN3 213 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 ARL2BPQ9Y2Y0 163 aa8.59□□□□□ -1.03
PTPDC1-204ENST00000620992 FAM186AA6NE01 2351 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 SMIM24O75264 130 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 SUPT20HL2P0C7V6 817 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 PTGER2P43116 358 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 CDH18Q13634 790 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 PTK6Q13882 451 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 MPP2Q14168 576 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC39A4Q6P5W5 647 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 RD3Q7Z3Z2 195 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 IFNEQ86WN2 208 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 DDIASQ8IXT1 998 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 C12orf50Q8NA57 414 aaPredicted RBP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 DEFB118Q96PH6 123 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 NIF3L1Q9GZT8 377 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 MROH8Q9H579 483 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 HMX1Q9NP08 348 aaPredicted RBP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 SIPA1L1O43166 1804 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 ADGRA3Q8IWK6 1321 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 H0Y626 953 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 OGTO15294 1046 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 NQO1P15559 274 aaKnown RBP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC1A1P43005 524 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 MAGEA4P43358 317 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 FBXW4P57775 412 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms