RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 ABLIM3O94929 683 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 KCNK5O95279 499 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 PROS1P07225 676 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 FAM163BP0C2L3 166 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 CPB1P15086 417 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 ATF2P15336 505 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 FERP16591 822 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 SOX5P35711 763 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 TAF6P49848 677 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 JAM2P57087 298 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 APBA1Q02410 837 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 TNK2Q07912 1038 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 LRRC32Q14392 662 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 ASIC2Q16515 512 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 RNF19BQ6ZMZ0 732 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 ARHGEF19Q8IW93 802 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 MFSD6LQ8IWD5 586 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 LRRC8AQ8IWT6 810 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 SHC3Q92529 594 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 TATDN2Q93075 761 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 LRRC3BQ96PB8 259 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 BAG1Q99933 345 aaPredicted RBP9.79□□□□□ -0.84
SYN3-213ENST00000619146 APOBEC3GQ9HC16 384 aaKnown RBP9.79□□□□□ -0.84
SYN3-213ENST00000619146 AVENQ9NQS1 362 aaPredicted RBP9.79□□□□□ -0.84
SYN3-213ENST00000619146 ASAH2Q9NR71 780 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 GDAP2Q9NXN4 497 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 NXF1Q9UBU9 619 aaKnown RBP9.79□□□□□ -0.84
SYN3-213ENST00000619146 INVSQ9Y283 1065 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 TIMM13Q9Y5L4 95 aaPredicted RBP9.79□□□□□ -0.84
SYN3-213ENST00000619146 PLXNB3Q9ULL4 1909 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 PTPRBP23467 1997 aa9.79□□□□□ -0.84
SYN3-213ENST00000619146 KPNA7A9QM74 516 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 FOXN3O00409 490 aaPredicted RBP9.78□□□□□ -0.84
SYN3-213ENST00000619146 DCLK1O15075 740 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 TRAPPC3O43617 180 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 RPP40O75818 363 aaKnown RBP9.78□□□□□ -0.84
SYN3-213ENST00000619146 FECHP22830 423 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 ANXA13P27216 316 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 CTHP32929 405 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 ASPAP45381 313 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 NOVA1P51513 510 aaKnown RBP9.78□□□□□ -0.84
SYN3-213ENST00000619146 BPIFB4P59827 614 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 LILRA4P59901 499 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 MEA1Q16626 185 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 ARHGAP44Q17R89 818 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 RNF43Q68DV7 783 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 SPOPLQ6IQ16 392 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 SLC8B1Q6J4K2 584 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 GJB7Q6PEY0 223 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 UNQ6494/PRO21346Q6UXR6 183 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 TMTC1Q8IUR5 882 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 TCEAL8Q8IYN2 117 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 FAM71AQ8IYT1 594 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 DEPDC1BQ8WUY9 529 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 DDX1Q92499 740 aaKnown RBP9.78□□□□□ -0.84
SYN3-213ENST00000619146 KREMEN1Q96MU8 473 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 MMS19Q96T76 1030 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 SMG9Q9H0W8 520 aaKnown RBP9.78□□□□□ -0.84
SYN3-213ENST00000619146 CRISPLD1Q9H336 500 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.78□□□□□ -0.84
SYN3-213ENST00000619146 CNTN6Q9UQ52 1028 aa9.78□□□□□ -0.84
SYN3-213ENST00000619146 C4orf47A7E2U8 309 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 TMEM189-UBE2V1I3L0A0 370 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 RNF225M0QZC1 329 aaPredicted RBP9.77□□□□□ -0.85
SYN3-213ENST00000619146 HUS1O60921 280 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 SERPING1P05155 500 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 ZNF806P0C7X5 589 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 KRT5P13647 590 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 CNR2P34972 360 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 MPLP40238 635 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 USP8P40818 1118 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 PRKCIP41743 596 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 AARSP49588 968 aaKnown RBP eCLIP9.77□□□□□ -0.85
SYN3-213ENST00000619146 SHC2P98077 582 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 KLHL30Q0D2K2 578 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 KIAA1211LQ6NV74 962 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 MAMSTRQ6ZN01 415 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 VPS36Q86VN1 386 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 WDR5BQ86VZ2 330 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 ARID3BQ8IVW6 561 aaPredicted RBP9.77□□□□□ -0.85
SYN3-213ENST00000619146 TOP6BLQ8N6T0 577 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 APPL2Q8NEU8 664 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 SPATA18Q8TC71 538 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 KAT5Q92993 513 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 HHIPQ96QV1 700 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 IER2Q9BTL4 223 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 GPR88Q9GZN0 384 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 CISHQ9NSE2 258 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 AJAP1Q9UKB5 411 aaPredicted RBP9.77□□□□□ -0.85
SYN3-213ENST00000619146 DSEQ9UL01 958 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 SLC27A5Q9Y2P5 690 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 YIPF1Q9Y548 306 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 SNX9Q9Y5X1 595 aa9.77□□□□□ -0.85
SYN3-213ENST00000619146 TP53BP1Q12888 1972 aaPredicted RBP9.77□□□□□ -0.85
SYN3-213ENST00000619146 GOLGA4Q13439 2230 aaKnown RBP9.76□□□□□ -0.85
SYN3-213ENST00000619146 PLXND1Q9Y4D7 1925 aa9.76□□□□□ -0.85
SYN3-213ENST00000619146 LOC400499M0QZD8 3231 aa9.76□□□□□ -0.85
SYN3-213ENST00000619146 SSU72P8A0A1W2PR75 194 aa9.76□□□□□ -0.85
SYN3-213ENST00000619146 MYBPHLA2RUH7 354 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms