RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 EMBQ6PCB8 327 aa21.49■■□□□ 1.03
SDHA-220ENST00000617470 B3GALNT2Q8NCR0 500 aa21.49■■□□□ 1.03
SDHA-220ENST00000617470 CAVIN3Q969G5 261 aa21.49■■□□□ 1.03
SDHA-220ENST00000617470 TRIM51Q9BSJ1 452 aa21.49■■□□□ 1.03
SDHA-220ENST00000617470 VIPAS39Q9H9C1 493 aa21.49■■□□□ 1.03
SDHA-220ENST00000617470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.49■■□□□ 1.03
SDHA-220ENST00000617470 LPXNO60711 386 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 KRT3P12035 628 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 CPB1P15086 417 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 PTPN1P18031 435 aaKnown RBP21.48■■□□□ 1.03
SDHA-220ENST00000617470 ZNF268Q14587 947 aaPredicted RBP21.48■■□□□ 1.03
SDHA-220ENST00000617470 SMC1AQ14683 1233 aaKnown RBP21.48■■□□□ 1.03
SDHA-220ENST00000617470 CCDC142Q17RM4 750 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 GOLGA7BQ2TAP0 167 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 ATP13A4Q4VNC1 1196 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 MDH1BQ5I0G3 518 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 RSPO2Q6UXX9 243 aaPredicted RBP21.48■■□□□ 1.03
SDHA-220ENST00000617470 TTC30AQ86WT1 665 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 MCRS1Q96EZ8 462 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 FAM49BQ9NUQ9 324 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 MTRRQ9UBK8 725 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 SSX2IPQ9Y2D8 614 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.48■■□□□ 1.03
SDHA-220ENST00000617470 OR6C75A6NL08 312 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 H3BQF6 201 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 DR1Q01658 176 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 INTS6LQ5JSJ4 861 aaKnown RBP21.48■■□□□ 1.03
SDHA-220ENST00000617470 TXNRD3NBQ6F5E7 133 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 ARFGAP1Q8N6T3 406 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 EIF1ADQ8N9N8 165 aaKnown RBP21.48■■□□□ 1.03
SDHA-220ENST00000617470 MAGOHBQ96A72 148 aaKnown RBP21.48■■□□□ 1.03
SDHA-220ENST00000617470 PCYOX1Q9UHG3 505 aa21.48■■□□□ 1.03
SDHA-220ENST00000617470 MYBPHLA2RUH7 354 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 TULP2O00295 520 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 SOX1O00570 391 aaPredicted RBP21.47■■□□□ 1.03
SDHA-220ENST00000617470 CHRNA3P32297 505 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 OR1D2P34982 312 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 IRS1P35568 1242 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 PIGHQ14442 188 aaPredicted RBP21.47■■□□□ 1.03
SDHA-220ENST00000617470 SLC39A12Q504Y0 691 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 C12orf50Q8NA57 414 aaPredicted RBP21.47■■□□□ 1.03
SDHA-220ENST00000617470 NEUROG2Q9H2A3 272 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 CRTAC1Q9NQ79 661 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 METTL5Q9NRN9 209 aaKnown RBP21.47■■□□□ 1.03
SDHA-220ENST00000617470 WDR35Q9P2L0 1181 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 BACE2Q9Y5Z0 518 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 ADAM12O43184 909 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 DAPK3O43293 454 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 CAMK1Q14012 370 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 STILQ15468 1287 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 LRRTM3Q86VH5 581 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 DCP1BQ8IZD4 617 aaKnown RBP21.47■■□□□ 1.03
SDHA-220ENST00000617470 CRYBG2Q8N1P7 616 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 EMC1Q8N766 993 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 TSEN2Q8NCE0 465 aaKnown RBP21.47■■□□□ 1.03
SDHA-220ENST00000617470 EXD1Q8NHP7 514 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 CLSTN3Q9BQT9 956 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 ZCWPW1Q9H0M4 648 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 NGRNQ9NPE2 291 aaKnown RBP21.47■■□□□ 1.03
SDHA-220ENST00000617470 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.47■■□□□ 1.033e-7■■■■□ 25
SDHA-220ENST00000617470 LCMT1Q9UIC8 334 aa21.47■■□□□ 1.03
SDHA-220ENST00000617470 HIDE1A8MVS5 230 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 GABBR2O75899 941 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 GJC1P36383 396 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 SSR1P43307 286 aaKnown RBP21.46■■□□□ 1.03
SDHA-220ENST00000617470 KLF1Q13351 362 aaPredicted RBP21.46■■□□□ 1.03
SDHA-220ENST00000617470 CUL1Q13616 776 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 DHX34Q14147 1143 aaKnown RBP21.46■■□□□ 1.03
SDHA-220ENST00000617470 LRRC38Q5VT99 294 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 ARHGAP17Q68EM7 881 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 JAMLQ86YT9 394 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 FNIP1Q8TF40 1166 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 LRCH3Q96II8 777 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 PGLYRP2Q96PD5 576 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 MED10Q9BTT4 135 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 OXCT2Q9BYC2 517 aaPredicted RBP21.46■■□□□ 1.03
SDHA-220ENST00000617470 SYNCQ9H7C4 482 aa21.46■■□□□ 1.03
SDHA-220ENST00000617470 E5RJQ4 531 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 PIK3R2O00459 728 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 TBC1D4O60343 1298 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 RALAP11233 206 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 CCDC130P13994 396 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 COILP38432 576 aaPredicted RBP21.45■■□□□ 1.02
SDHA-220ENST00000617470 CREMQ03060 361 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 NNTQ13423 1086 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 DUPD1Q68J44 220 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 PMF1Q6P1K2 205 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 CCDC137Q6PK04 289 aaKnown RBP21.45■■□□□ 1.02
SDHA-220ENST00000617470 MRPL43Q8N983 215 aaKnown RBP21.45■■□□□ 1.02
SDHA-220ENST00000617470 MYCBPAPQ8TBZ2 947 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 PIWIL1Q96J94 861 aaKnown RBP21.45■■□□□ 1.02
SDHA-220ENST00000617470 EMILIN2Q9BXX0 1053 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 LRRC19Q9H756 370 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 TMLHEQ9NVH6 421 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 KLHL11Q9NVR0 708 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 FAM187AA6NFU0 413 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 TEX28O15482 410 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 LILRB3O75022 631 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 CNPP09543 421 aaKnown RBP21.45■■□□□ 1.02
SDHA-220ENST00000617470 ADORA2BP29275 332 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms