RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ABOP16442 354 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 RCAN1P53805 252 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 OCA2Q04671 838 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 OVOS1Q6IE37 1185 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 USP45Q70EL2 814 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 OTOP1Q7RTM1 612 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 KLHL6Q8WZ60 621 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 TMEM175Q9BSA9 504 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 C2orf49Q9BVC5 232 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.48□□□□□ -1.851e-8■■■□□ 16
LPP-220ENST00000617246 SPHK2Q9NRA0 654 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 PANK4Q9NVE7 773 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 FANCLQ9NW38 375 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 SMIM24O75264 130 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ICAM1P05362 532 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 RNF149Q8NC42 400 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 MYRIPQ8NFW9 859 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ADGRE3Q9BY15 652 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 SCAF8Q9UPN6 1271 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 WASHC1A8K0Z3 465 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 WASH3PC4AMC7 463 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 H0YGN5 161 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 M0R3G1 203 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 RBP5P82980 135 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 FOXM1Q08050 763 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 C14orf28Q4W4Y0 310 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 WASH2PQ6VEQ5 465 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 GAB3Q8WWW8 586 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 MTBPQ96DY7 904 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ZNF717Q9BY31 904 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 FBXL5Q9UKA1 691 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 EOMESO95936 686 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 CRYBA1P05813 215 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 DRD1P21728 446 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 INPP1P49441 399 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 LBRQ14739 615 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 SPATA1Q5VX52 437 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 METTL7BQ6UX53 244 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 SH3RF3Q8TEJ3 882 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 FAM126AQ9BYI3 521 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 SH2B2O14492 632 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 CMA1P23946 247 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ATP5C1P36542 298 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 MARSP56192 900 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 NSUN2Q08J23 767 aaKnown RBP eCLIP3.48□□□□□ -1.85
LPP-220ENST00000617246 DUOXA2Q1HG44 320 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 PRAMEF19Q5SWL8 479 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 SWSAP1Q6NVH7 229 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 FIP1L1Q6UN15 594 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 TTC7BQ86TV6 843 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 MANSC1Q9H8J5 431 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 CBX8Q9HC52 389 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 GPAMQ9HCL2 828 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 KDSRQ06136 332 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 DYMQ7RTS9 669 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 PIGKQ92643 395 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 RPRD1AQ96P16 312 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 LRRC2Q9BYS8 371 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 TMEM39BQ9GZU3 492 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 HACD3Q9P035 362 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 WWP2O00308 870 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 NTSR2O95665 410 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 CFHP08603 1231 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 HNRNPA1P09651 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
LPP-220ENST00000617246 MSH3P20585 1137 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ELOCQ15369 112 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 RBBP7Q16576 425 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ENOSF1Q7L5Y1 443 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 RHBDD1Q8TEB9 315 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 GIPC2Q8TF65 315 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 PRICKLE3O43900 615 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 FGFR2P21802 821 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 SMAD3P84022 425 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 CTTNQ14247 550 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 PUM1Q14671 1186 aaKnown RBP eCLIP3.48□□□□□ -1.85
LPP-220ENST00000617246 GLE1Q53GS7 698 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 PPP6R3Q5H9R7 873 aaPredicted RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 REPS1Q96D71 796 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ZDHHC5Q9C0B5 715 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ADNPQ9H2P0 1102 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 KCND1Q9NSA2 647 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 GBF1Q92538 1859 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 PPP1R3GB7ZBB8 358 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 F5H6K3 240 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 LMNAP02545 664 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 JUNDP17535 347 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 ATP6V1C1P21283 382 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 RNASE9P60153 205 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 RPL6Q02878 288 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 KLRC3Q07444 240 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 EDRF1Q3B7T1 1238 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 APOA5Q6Q788 366 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 CELF5Q8N6W0 485 aaKnown RBP3.48□□□□□ -1.85
LPP-220ENST00000617246 OSBPL2Q9H1P3 480 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 C17orf75Q9HAS0 396 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 TMBIM4Q9HC24 238 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 PCDHGC3Q9UN70 934 aa3.48□□□□□ -1.85
LPP-220ENST00000617246 KPNA3O00505 521 aaPredicted RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 GSNP06396 782 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 GDI1P31150 447 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms