RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SPECC1LQ69YQ0 1117 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 PKN3Q6P5Z2 889 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 ZNF397Q8NF99 534 aaPredicted RBP15.73■□□□□ 0.11
UBXN1-218ENST00000616865 SPATA18Q8TC71 538 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 GIPC2Q8TF65 315 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 IQCDQ96DY2 449 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 CHFRQ96EP1 664 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 MRFAP1L1Q96HT8 127 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 SPAG5Q96R06 1193 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 FAM83CQ9BQN1 747 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 SIX2Q9NPC8 291 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 NLRC4Q9NPP4 1024 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 HPS4Q9NQG7 708 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 PCDHB4Q9Y5E5 795 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 FHOD1Q9Y613 1164 aa15.73■□□□□ 0.11
UBXN1-218ENST00000616865 MYO16Q9Y6X6 1858 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 CCDC163A0A0D9SF12 145 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 A8MXQ7 604 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 TACC1O75410 805 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 EPN2O95208 641 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 ADCY5O95622 1261 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 WARSP23381 471 aaKnown RBP15.72■□□□□ 0.11
UBXN1-218ENST00000616865 PCSK1P29120 753 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 AVPR1AP37288 418 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 RUNX3Q13761 415 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 TRIM14Q14142 442 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 AASDHQ4L235 1098 aaPredicted RBP15.72■□□□□ 0.11
UBXN1-218ENST00000616865 TMEM196Q5HYL7 178 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 FSTL4Q6MZW2 842 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 TMC6Q7Z403 805 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 TMEM150AQ86TG1 271 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 LRRTM3Q86VH5 581 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 GAB3Q8WWW8 586 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 DDX1Q92499 740 aaKnown RBP15.72■□□□□ 0.11
UBXN1-218ENST00000616865 JAKMIP2Q96AA8 810 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 ARID3AQ99856 593 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 MRPL45Q9BRJ2 306 aaKnown RBP15.72■□□□□ 0.11
UBXN1-218ENST00000616865 GANQ9H2C0 597 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 KIF9Q9HAQ2 790 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 GKN1Q9NS71 199 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 CISHQ9NSE2 258 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 DDX43Q9NXZ2 648 aaKnown RBP15.72■□□□□ 0.11
UBXN1-218ENST00000616865 ABI2Q9NYB9 513 aaPredicted RBP15.72■□□□□ 0.11
UBXN1-218ENST00000616865 CCL26Q9Y258 94 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 SPAG17Q6Q759 2223 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 ACACBO00763 2458 aa15.72■□□□□ 0.11
UBXN1-218ENST00000616865 ITIH6Q6UXX5 1313 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 GOLGA6L6A8MZA4 724 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 RPP40O75818 363 aaKnown RBP15.71■□□□□ 0.11
UBXN1-218ENST00000616865 PDGFRBP09619 1106 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 DDX6P26196 483 aaKnown RBP eCLIP15.71■□□□□ 0.115e-6■□□□□ 8.4
UBXN1-218ENST00000616865 PXNP49023 591 aaPredicted RBP15.71■□□□□ 0.11
UBXN1-218ENST00000616865 LIMK1P53667 647 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 TSPY1Q01534 308 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 GRSF1Q12849 480 aaKnown RBP eCLIP15.71■□□□□ 0.11
UBXN1-218ENST00000616865 ST3GAL2Q16842 350 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 TRIM68Q6AZZ1 485 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 IL31Q6EBC2 164 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 VSTM4Q8IW00 320 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 MAB21L3Q8N8X9 362 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 CPLX3Q8WVH0 158 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 KAT5Q92993 513 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 USP13Q92995 863 aaPredicted RBP15.71■□□□□ 0.11
UBXN1-218ENST00000616865 LOXL4Q96JB6 756 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 KREMEN1Q96MU8 473 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 STK33Q9BYT3 514 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 SDCBP2Q9H190 292 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 ARRDC1-AS1Q9H2J1 176 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 EBF3Q9H4W6 596 aa15.71■□□□□ 0.11
UBXN1-218ENST00000616865 FAM124BQ9H5Z6 455 aaPredicted RBP15.71■□□□□ 0.11
UBXN1-218ENST00000616865 TPRP12270 2363 aaKnown RBP15.71■□□□□ 0.11
UBXN1-218ENST00000616865 OTOL1A6NHN0 477 aaPredicted RBP15.7■□□□□ 0.1
UBXN1-218ENST00000616865 TRDMT1O14717 391 aaKnown RBP15.7■□□□□ 0.1
UBXN1-218ENST00000616865 AXIN1O15169 862 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 ATG13O75143 517 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 F11P03951 625 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 ZNF806P0C7X5 589 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 HMGA1P17096 107 aaKnown RBP15.7■□□□□ 0.1
UBXN1-218ENST00000616865 KCNA4P22459 653 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 PBX1P40424 430 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 NDST1P52848 882 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 DRAP1Q14919 205 aaPredicted RBP15.7■□□□□ 0.1
UBXN1-218ENST00000616865 SF3A2Q15428 464 aaKnown RBP15.7■□□□□ 0.1
UBXN1-218ENST00000616865 ZNF394Q53GI3 561 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 TMEM270Q6UE05 265 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 LIMS2Q7Z4I7 341 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 UNC93AQ86WB7 457 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 FMNL3Q8IVF7 1028 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 DCP1BQ8IZD4 617 aaKnown RBP15.7■□□□□ 0.1
UBXN1-218ENST00000616865 C12orf50Q8NA57 414 aaPredicted RBP15.7■□□□□ 0.1
UBXN1-218ENST00000616865 RIN3Q8TB24 985 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 KBTBD7Q8WVZ9 684 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 TNIP3Q96KP6 325 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 NT5C1AQ9BXI3 368 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 EDEM3Q9BZQ6 932 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 SLC8A2Q9UPR5 921 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 PCDHB5Q9Y5E4 795 aa15.7■□□□□ 0.1
UBXN1-218ENST00000616865 SOBPA7XYQ1 873 aa15.69■□□□□ 0.1
UBXN1-218ENST00000616865 EPHB6O15197 1021 aa15.69■□□□□ 0.1
UBXN1-218ENST00000616865 RNF40O75150 1001 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms