RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 MAP6Q96JE9 813 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 MOGAT1Q96PD6 335 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 NAP1L4Q99733 375 aaKnown RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 PHF20Q9BVI0 1012 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 IFIH1Q9BYX4 1025 aaKnown RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 CLPBQ9H078 707 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 CUEDC2Q9H467 287 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 ATP6V1HQ9UI12 483 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 SLC9A3R1O14745 358 aaPredicted RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 SULT1C4O75897 302 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 ALOX5P09917 674 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 SHMT1P34896 483 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 IFNAR2P48551 515 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 POLGP54098 1239 aaPredicted RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 NUP107P57740 925 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 RELQ04864 619 aaPredicted RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 SIM2Q14190 667 aaPredicted RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 RNF19BQ6ZMZ0 732 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 UBLCP1Q8WVY7 318 aaPredicted RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 IPCEF1Q8WWN9 437 aaPredicted RBP15.91■□□□□ 0.14
NOP56-220ENST00000616692 PSD2Q9BQI7 771 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 MYLK2Q9H1R3 596 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 PRKAG2Q9UGJ0 569 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 HYOU1Q9Y4L1 999 aa15.91■□□□□ 0.14
NOP56-220ENST00000616692 KRT2P35908 639 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 ATP6V0D1P61421 351 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 DYNLL1P63167 89 aaKnown RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 MGAT5Q09328 741 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 ACVR2BQ13705 512 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 ZNF829Q3KNS6 432 aaPredicted RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 FBXO43Q4G163 708 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 BRDTQ58F21 947 aaPredicted RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 ADAMTSL2Q86TH1 951 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 CCNYL1Q8N7R7 359 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 USB1Q9BQ65 265 aaKnown RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 ZDHHC7Q9NXF8 308 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 FNIP2Q9P278 1114 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 ARHGAP26Q9UNA1 814 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 LTBP2Q14767 1821 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 YEATS4O95619 227 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 EYA4O95677 639 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 PRAMEP78395 509 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 MRPS15P82914 257 aaKnown RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 LETM2Q2VYF4 491 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 TTBK2Q6IQ55 1244 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 TMC5Q6UXY8 1006 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 OTOP3Q7RTS5 596 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 REXO5Q96IC2 774 aaKnown RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 PURBQ96QR8 312 aaKnown RBP15.9■□□□□ 0.14
NOP56-220ENST00000616692 HEMGNQ9BXL5 484 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 PLK2Q9NYY3 685 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 RNF112Q9ULX5 631 aa15.9■□□□□ 0.14
NOP56-220ENST00000616692 PRSS47A8MTI9 375 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 ATP6V1G2-DDX39BF2Z307 99 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 RPN1P04843 607 aaKnown RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 ZNF3P17036 446 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 SLC9A3P48764 834 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 C21orf59P57076 290 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 TBX4P57082 545 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 MYL6P60660 151 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 ASPHQ12797 758 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 RNASEH2BQ5TBB1 312 aaKnown RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 FAM205BPQ63HN1 556 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 TAS2R42Q7RTR8 314 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 PRUNE1Q86TP1 453 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 ZNF410Q86VK4 478 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 ECHDC2Q86YB7 292 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 DCP2Q8IU60 420 aaKnown RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 MAGEB6Q8N7X4 407 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 CCDC89Q8N998 374 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 SGK3Q96BR1 496 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 GHITMQ9H3K2 345 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 SLITRK6Q9H5Y7 841 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 SMARCAL1Q9NZC9 954 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 WASF2Q9Y6W5 498 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 NCAM2O15394 837 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 SEPT4O43236 478 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 ATMINO43313 823 aaPredicted RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 NDUFA2O43678 99 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 KRT5P13647 590 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 PFKFB1P16118 471 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 CDH2P19022 906 aaPredicted RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 PKLRP30613 574 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 TFAP4Q01664 338 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 LEXMQ3ZCV2 418 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 ARMC4Q5T2S8 1044 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 FCRLBQ6BAA4 426 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 FAM171BQ6P995 826 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 GALNT13Q8IUC8 556 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 KIAA2013Q8IYS2 634 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 DEPDC4Q8N2C3 294 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 NIFKQ9BYG3 293 aaKnown RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 MRPS26Q9BYN8 205 aaKnown RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 FLRT1Q9NZU1 646 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 UBA2Q9UBT2 640 aaPredicted RBP15.89■□□□□ 0.13
NOP56-220ENST00000616692 GNPTGQ9UJJ9 305 aa15.89■□□□□ 0.13
NOP56-220ENST00000616692 NAV1Q8NEY1 1877 aa15.88■□□□□ 0.13
NOP56-220ENST00000616692 KBTBD13C9JR72 458 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms