RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SLC26A11Q86WA9 606 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 TTC13Q8NBP0 860 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 DCAF4Q8WV16 495 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 MKL1Q969V6 931 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 AZIN2Q96A70 460 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 EME1Q96AY2 570 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 CEP170P1Q96L14 293 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 USP29Q9HBJ7 922 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 DDX43Q9NXZ2 648 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 ZNF232Q9UNY5 417 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 FIS1Q9Y3D6 152 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 HBS1LQ9Y450 684 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 CTDP1Q9Y5B0 961 aaPredicted RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 MYH11P35749 1972 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 COL4A1P02462 1669 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 MYPNQ86TC9 1320 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 hCG_1818297A0A087WSY0 165 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 A0A0B4J269 797 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 KCNN4O15554 427 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 BUD23O43709 281 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 ITM2AO43736 263 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 RAD17O75943 681 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 CSPG5O95196 566 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 TGDSO95455 350 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 P4HBP07237 508 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 CDK4P11802 303 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 STIP1P31948 543 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 GMPRP36959 345 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 ECE1P42892 770 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 QARSP47897 775 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 GABPAQ06546 454 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 CCNIQ14094 377 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 FLOT2Q14254 428 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 PDPK2PQ6A1A2 396 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 TMC7Q7Z402 723 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 GIPC3Q8TF64 312 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 C20orf27Q9GZN8 174 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 PAIP1Q9H074 479 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 PPCSQ9HAB8 311 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 FBXO28Q9NVF7 368 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 HSFX1Q9UBD0 423 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 CDH22Q9UJ99 828 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 TBX20Q9UMR3 447 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 UBE4BO95155 1302 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 PLCH1Q4KWH8 1693 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 IGLV3-22A0A075B6J6 115 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 DDTLA6NHG4 134 aaPredicted RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 SLC26A4O43511 780 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 KLHL2O95198 593 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TFAP2AP05549 437 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 FAM58BPP0C7Q3 252 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ATP2B4P23634 1241 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 STT3AP46977 705 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 NPTX2P47972 431 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 GPC3P51654 580 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 NOMO3P69849 1222 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ATP1A4Q13733 1029 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 SPDYAQ5MJ70 313 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 SLC10A5Q5PT55 438 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 RNF111Q6ZNA4 994 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ABRAQ8N0Z2 381 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 LRRC43Q8N309 656 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 RNF169Q8NCN4 708 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ADAM32Q8TC27 787 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TMA16Q96EY4 203 aaKnown RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 MBOAT7Q96N66 472 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CDRT15Q96T59 188 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 RNPEPQ9H4A4 650 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 STK32BQ9NY57 414 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ADA2Q9NZK5 511 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 GNEQ9Y223 722 aaKnown RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 PHRF1Q9P1Y6 1649 aaKnown RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 A0A1B0GTW7 788 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 LRRIQ4A6NIV6 560 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 VILLO15195 856 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ADCY6O43306 1168 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 GRAP2O75791 330 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CRTAMO95727 393 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 HSPA4LO95757 839 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 OATP04181 439 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 SERPINA6P08185 405 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CCDC166P0CW27 439 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CRADDP78560 199 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ROR1Q01973 937 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CYP24A1Q07973 514 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 MMRN1Q13201 1228 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 LPIN1Q14693 890 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TAF5Q15542 800 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 GPAT2Q6NUI2 795 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 DUS1LQ6P1R4 473 aaKnown RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 KLHL35Q6PF15 583 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 MON1BQ7L1V2 547 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 RELL1Q8IUW5 271 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 HACE1Q8IYU2 909 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 PQLC1Q8N2U9 271 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ZNF276Q8N554 614 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TTLL6Q8N841 843 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 FAM156AQ8NDB6 213 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms