RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 SEC24AO95486 1093 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 CXCL14O95715 111 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 LTFP02788 710 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 CNPP09543 421 aaKnown RBP24.54■■□□□ 1.52
CCND3-223ENST00000616010 DNAJB1P25685 340 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 MATKP42679 507 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 RPL10AP62906 217 aaKnown RBP24.54■■□□□ 1.52
CCND3-223ENST00000616010 TUBB2AQ13885 445 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 DCAF6Q58WW2 860 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 DENND5BQ6ZUT9 1274 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 RHOT1Q8IXI2 618 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 ARFGAP1Q8N6T3 406 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 SPPL3Q8TCT6 385 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 C11orf84Q9BUA3 381 aaPredicted RBP24.54■■□□□ 1.52
CCND3-223ENST00000616010 TUBB2BQ9BVA1 445 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 CYP4F11Q9HBI6 524 aa24.54■■□□□ 1.52
CCND3-223ENST00000616010 PLXNA3P51805 1871 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 PSTPIP1O43586 416 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 RNF8O76064 485 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 PEX5P50542 639 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 USP46P62068 366 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 ACAP1Q15027 740 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 PLPP4Q5VZY2 271 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 UBE2Q2Q8WVN8 375 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 GOLGA1Q92805 767 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 SPATA17Q96L03 361 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 SLC2A13Q96QE2 648 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 NGRNQ9NPE2 291 aaKnown RBP24.53■■□□□ 1.52
CCND3-223ENST00000616010 TLR9Q9NR96 1032 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 GREB1Q4ZG55 1949 aa24.53■■□□□ 1.52
CCND3-223ENST00000616010 DESP17661 470 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 TFE3P19532 575 aaPredicted RBP24.52■■□□□ 1.52
CCND3-223ENST00000616010 PTPN9P43378 593 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 TUFMP49411 452 aaKnown RBP24.52■■□□□ 1.52
CCND3-223ENST00000616010 WHAMMP3Q1A5X7 153 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 RAB6CQ53S08 254 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 FAM172AQ8WUF8 416 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 TGS1Q96RS0 853 aaKnown RBP24.52■■□□□ 1.52
CCND3-223ENST00000616010 DDX23Q9BUQ8 820 aaKnown RBP24.52■■□□□ 1.52
CCND3-223ENST00000616010 RAB6CQ9H0N0 254 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 FBXO44Q9H4M3 255 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.52■■□□□ 1.52
CCND3-223ENST00000616010 ZNF638Q14966 1978 aaKnown RBP24.52■■□□□ 1.52
CCND3-223ENST00000616010 CAPN9O14815 690 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 UBE3AQ05086 875 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 CREG2Q8IUH2 290 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 GIPC2Q8TF65 315 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 MS4A14Q96JA4 679 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 PBX4Q9BYU1 374 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 CARD9Q9H257 536 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 EHD2Q9NZN4 543 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 HSFX1Q9UBD0 423 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 NAALADL1Q9UQQ1 740 aa24.52■■□□□ 1.52
CCND3-223ENST00000616010 FYNP06241 537 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 RB1P06400 928 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 RWDD2BP57060 319 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 SLC25A11Q02978 314 aaKnown RBP24.51■■□□□ 1.51
CCND3-223ENST00000616010 ZNF211Q13398 564 aaPredicted RBP24.51■■□□□ 1.51
CCND3-223ENST00000616010 MTMR3Q13615 1198 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 SYPL2Q5VXT5 272 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 PBKQ96KB5 322 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 ADAM33Q9BZ11 813 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 SMARCAL1Q9NZC9 954 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 YIPF1Q9Y548 306 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 CHD9Q3L8U1 2897 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 PRRG1O14668 218 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 NCAM1P13591 858 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 MIPP30301 263 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 NOS2P35228 1153 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 SULT1E1P49888 294 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 SMC1AQ14683 1233 aaKnown RBP24.51■■□□□ 1.51
CCND3-223ENST00000616010 BSPRYQ5W0U4 402 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 TXNRD3NBQ6F5E7 133 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 EDEM1Q92611 657 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 SAMD11Q96NU1 681 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 TBCBQ99426 244 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 STAP1Q9ULZ2 295 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 SCML2Q9UQR0 700 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 IRAK3Q9Y616 596 aa24.51■■□□□ 1.51
CCND3-223ENST00000616010 COL4A4P53420 1690 aaPredicted RBP24.5■■□□□ 1.51
CCND3-223ENST00000616010 HIDE1A8MVS5 230 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 CES2O00748 559 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 GRM6O15303 877 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 CEP104O60308 925 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 RTN3O95197 1032 aaPredicted RBP24.5■■□□□ 1.51
CCND3-223ENST00000616010 ELF1P32519 619 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 YWHAGP61981 247 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCND3-223ENST00000616010 SLC25A52Q3SY17 297 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 CCDC181Q5TID7 509 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 CARD6Q9BX69 1037 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 KLHL11Q9NVR0 708 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 PCSK1NQ9UHG2 260 aa24.5■■□□□ 1.51
CCND3-223ENST00000616010 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.49■■□□□ 1.51
CCND3-223ENST00000616010 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.49■■□□□ 1.51
CCND3-223ENST00000616010 ADH1AP07327 375 aa24.49■■□□□ 1.51
CCND3-223ENST00000616010 YWHAQP27348 245 aa24.49■■□□□ 1.51
CCND3-223ENST00000616010 IL1R2P27930 398 aa24.49■■□□□ 1.51
CCND3-223ENST00000616010 PCK1P35558 622 aa24.49■■□□□ 1.51
CCND3-223ENST00000616010 PITX1P78337 314 aaPredicted RBP24.49■■□□□ 1.51
CCND3-223ENST00000616010 HADHQ16836 314 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms