RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 FAM136AQ96C01 138 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 SLC7A6OSQ96CW6 309 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-208ENST00000613073 ZNF333Q96JL9 665 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-208ENST00000613073 ITGA11Q9UKX5 1188 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 STRIP2Q9ULQ0 834 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 GPR32O75388 356 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 ITGA8P53708 1063 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 MAP2K5Q13163 448 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 TAF1CQ15572 869 aaPredicted RBP17.19■□□□□ 0.34
CNOT3-208ENST00000613073 CCNG2Q16589 344 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 PARP6Q2NL67 630 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SNX30Q5VWJ9 437 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 XYLT1Q86Y38 959 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 GRK7Q8WTQ7 553 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SCG3Q8WXD2 468 aaKnown RBP17.19■□□□□ 0.34
CNOT3-208ENST00000613073 C18orf25Q96B23 403 aaPredicted RBP17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.19■□□□□ 0.344e-6■■■■□ 20.4
CNOT3-208ENST00000613073 GNEQ9Y223 722 aaKnown RBP17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SCN1AP35498 2009 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 RRN3P2A6NIE6 340 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 ETS2P15036 469 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 ATF2P15336 505 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 AKAP5P24588 427 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 IVDP26440 423 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 CETN2P41208 172 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 GRM5P41594 1212 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SPOCD1Q6ZMY3 1216 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 RFX8Q6ZV50 586 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 ZNF365Q70YC5 407 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 ARFGAP1Q8N6T3 406 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SNF8Q96H20 258 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 TMEM109Q9BVC6 243 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 NXF3Q9H4D5 531 aaKnown RBP17.19■□□□□ 0.34
CNOT3-208ENST00000613073 TUBGCP4Q9UGJ1 667 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 PCSK1NQ9UHG2 260 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 DNPEPQ9ULA0 475 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SNX9Q9Y5X1 595 aa17.19■□□□□ 0.34
CNOT3-208ENST00000613073 SIGLEC16A6NMB1 481 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 KRT36O76013 467 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 F2P00734 622 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 T-ENOLP0DO92 83 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 DYNLT1P63172 113 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 TAP1Q03518 808 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 PTK6Q13882 451 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 KYAT1Q16773 422 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 MORN1Q5T089 497 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 IRGCQ6NXR0 463 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 DSTYKQ6XUX3 929 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 VRTNQ9H8Y1 702 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 SAE1Q9UBE0 346 aaPredicted RBP17.18■□□□□ 0.34
CNOT3-208ENST00000613073 BARX2Q9UMQ3 279 aaPredicted RBP17.18■□□□□ 0.34
CNOT3-208ENST00000613073 TRIP12Q14669 1992 aaPredicted RBP17.18■□□□□ 0.34
CNOT3-208ENST00000613073 NRCAMQ92823 1304 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 TREHO43280 583 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 MYL3P08590 195 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 CYP3A5P20815 502 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 IL1R2P27930 398 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 GPD2P43304 727 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 KLHL23Q8NBE8 558 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 GLIS1Q8NBF1 620 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 TMEM40Q8WWA1 233 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 NRG4Q8WWG1 115 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 MAGEB18Q96M61 343 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 CYP3A43Q9HB55 503 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 AAASQ9NRG9 546 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 KLK14Q9P0G3 267 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 WHRNQ9P202 907 aa17.18■□□□□ 0.34
CNOT3-208ENST00000613073 E7ENQ6 273 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 LRCH4O75427 683 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ZSCAN5DPP0CG00 497 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 GSTT1P30711 240 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 MFSD10Q14728 455 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 RASIP1Q5U651 963 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 HHATQ5VTY9 493 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 SLC27A1Q6PCB7 646 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ZNF148Q9UQR1 794 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 GRAP2O75791 330 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 TJP3O95049 919 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ZNF865P0CJ78 1059 aaPredicted RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ITIH2P19823 946 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 DCAF4L1Q3SXM0 396 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ARHGEF18Q6ZSZ5 1173 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ENDOVQ8N8Q3 282 aaKnown RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 IFT43Q96FT9 208 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 MRPL45Q9BRJ2 306 aaKnown RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 CHCHD3Q9NX63 227 aaKnown RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ANAPC5Q9UJX4 755 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 TSPAN16Q9UKR8 245 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 LRCH1Q9Y2L9 728 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 VDRP11473 427 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 ETS1P14921 441 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 VHLP40337 213 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 RGS7P49802 495 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 PLCB3Q01970 1234 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 TAF1BQ53T94 588 aaPredicted RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 FAM102AQ5T9C2 384 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms