RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PPP3CCP48454 512 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 ORC2Q13416 577 aaPredicted RBP10.98□□□□□ -0.65
SSX3-204ENST00000612497 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
SSX3-204ENST00000612497 KIF19Q2TAC6 998 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 KRT79Q5XKE5 535 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 GRAMD4Q6IC98 578 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 DENND5BQ6ZUT9 1274 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 KCNK18Q7Z418 384 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 SPACA3Q8IXA5 215 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 SCFD1Q8WVM8 642 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 SNX19Q92543 992 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 OTUB2Q96DC9 234 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 SPATA17Q96L03 361 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 GABRG3Q99928 467 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 RAB34Q9BZG1 259 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 TM6SF1Q9BZW5 370 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 SEMA4CQ9C0C4 833 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 DNAJC17Q9NVM6 304 aaKnown RBP10.98□□□□□ -0.65
SSX3-204ENST00000612497 EHD2Q9NZN4 543 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 LARSQ9P2J5 1176 aaKnown RBP10.98□□□□□ -0.65
SSX3-204ENST00000612497 L1RE1Q9UN81 338 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 SNX11Q9Y5W9 270 aa10.98□□□□□ -0.65
SSX3-204ENST00000612497 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
SSX3-204ENST00000612497 E2F8A0AVK6 867 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 PP2D1A8MPX8 630 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 WASH3PC4AMC7 463 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 KCNK3O14649 394 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 HCRTO43612 131 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 OAS1P00973 400 aaKnown RBP10.97□□□□□ -0.65
SSX3-204ENST00000612497 C6P13671 934 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 BDNFP23560 247 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 PCSK1P29120 753 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 AFF3P51826 1226 aaKnown RBP10.97□□□□□ -0.65
SSX3-204ENST00000612497 NCKAP1LP55160 1127 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 RHDQ02161 417 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 TARDBPQ13148 414 aaKnown RBP eCLIP10.97□□□□□ -0.65
SSX3-204ENST00000612497 LY6DQ14210 128 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 RTP5Q14D33 572 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 INAVAQ3KP66 663 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 TTC38Q5R3I4 469 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 C4orf50Q6ZRC1 276 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 TMEM25Q86YD3 366 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 TMEM86AQ8N2M4 240 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 KRI1Q8N9T8 703 aaKnown RBP10.97□□□□□ -0.65
SSX3-204ENST00000612497 WBP1Q96G27 269 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 TMEM176AQ96HP8 235 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 NRSN2Q9GZP1 204 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 ITM2CQ9NQX7 267 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 SPHK2Q9NRA0 654 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 MAGEC2Q9UBF1 373 aaPredicted RBP10.97□□□□□ -0.65
SSX3-204ENST00000612497 DACH1Q9UI36 760 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 COL5A1P20908 1838 aaPredicted RBP10.97□□□□□ -0.65
SSX3-204ENST00000612497 NUMA1Q14980 2115 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 DOPEY2Q9Y3R5 2298 aa10.97□□□□□ -0.65
SSX3-204ENST00000612497 NPHP3-ACAD11A0A0J9YXS1 232 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 KCNJ18B7U540 433 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 PRRT4C9JH25 899 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 BRINP1O60477 761 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 ATP2C2O75185 946 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 PIGRP01833 764 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 OXTRP30559 389 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 POLR2BP30876 1174 aaKnown RBP10.96□□□□□ -0.65
SSX3-204ENST00000612497 ACTN2P35609 894 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 LHX1P48742 406 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 CCT8P50990 548 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 IRX6P78412 446 aaPredicted RBP10.96□□□□□ -0.65
SSX3-204ENST00000612497 IL9RQ01113 521 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 GUCY1B3Q02153 619 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 TAF10Q12962 218 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 STARD3Q14849 445 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 TEAD4Q15561 434 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 ADALQ6DHV7 355 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 SLC39A4Q6P5W5 647 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 VSTM1Q6UX27 236 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
SSX3-204ENST00000612497 OSTM1Q86WC4 334 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 BBS7Q8IWZ6 715 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 ADGRF2Q8IZF7 708 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 NECAB1Q8N987 351 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 IGSF22Q8N9C0 903 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 MYLPFQ96A32 169 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 CEP295NLQ96MC4 621 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 LGMNQ99538 433 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 TTLL2Q9BWV7 592 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 USP36Q9P275 1121 aaKnown RBP10.96□□□□□ -0.65
SSX3-204ENST00000612497 AGAP1Q9UPQ3 857 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 ANKRD6Q9Y2G4 727 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 PCDHGA1Q9Y5H4 931 aa10.96□□□□□ -0.65
SSX3-204ENST00000612497 K7ENM7 598 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 GFRA2O00451 464 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 ENC1O14682 589 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 PCDHGA12O60330 932 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 RFPL3O75679 317 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 ITGB3P05106 788 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 CDK4P11802 303 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 CSRP3P50461 194 aa10.95□□□□□ -0.66
SSX3-204ENST00000612497 TPMTP51580 245 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms