RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 MAP3K6O95382 1288 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 ERBB2P04626 1255 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 YY1P25490 414 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 NAMPTP43490 491 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 DSG1Q02413 1049 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 CDC16Q13042 620 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 TRMT5Q32P41 509 aaKnown RBP15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 RAPH1Q70E73 1250 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 BRSK2Q8IWQ3 736 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 CEP120Q8N960 986 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 LPAR1Q92633 364 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 CCDC106Q9BWC9 280 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 RAB6BQ9NRW1 208 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 PCMTD2Q9NV79 361 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 NDE1Q9NXR1 346 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 SIRPGQ9P1W8 387 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 CIB2O75838 187 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 RTN3O95197 1032 aaPredicted RBP15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 SP2Q02086 613 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 GSTA3Q16772 222 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 CMASQ8NFW8 434 aaPredicted RBP15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 RNF217Q8TC41 542 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 GMLQ99445 158 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 WWP1Q9H0M0 922 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 DHX33Q9H6R0 707 aaKnown RBP15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 POPDC2Q9HBU9 364 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 PDP2Q9P2J9 529 aa15.73■□□□□ 0.11
PCDHGB1-202ENST00000611598 FAM189A1O60320 539 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 RNASEH1O60930 286 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 LGR5O75473 907 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 SNRPAP09012 282 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 SUPT20HL2P0C7V6 817 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 CSH1P0DML2 217 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 CSH2P0DML3 217 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 ASPAP45381 313 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 SUPT20HL1Q3ZLR7 823 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 STYK1Q6J9G0 422 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 C1orf228Q6PIY5 440 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 XYLT1Q86Y38 959 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 NUDCD3Q8IVD9 361 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 GSTCDQ8NEC7 633 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 MTBPQ96DY7 904 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 RILPQ96NA2 401 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 NR1H4Q96RI1 486 aaPredicted RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 NXF1Q9UBU9 619 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 USP18Q9UMW8 372 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 HBS1LQ9Y450 684 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 VWA5AO00534 786 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 KRT37O76014 449 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 STIP1P31948 543 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 ARL2P36404 184 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 IRX4P78413 519 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 TFAMQ00059 246 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 CAPSQ13938 189 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 NOMO1Q15155 1222 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 LRRC36Q1X8D7 754 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 ANGEL2Q5VTE6 544 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 WDR49Q8IV35 697 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 TCHPQ9BT92 498 aa15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 ZC3H7BQ9UGR2 993 aaKnown RBP15.72■□□□□ 0.11
PCDHGB1-202ENST00000611598 H7C0C1 242 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 SORBS2O94875 1100 aaKnown RBP15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 TRUB2O95900 331 aaKnown RBP15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 C6orf222P0C671 652 aaPredicted RBP15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 CRABP2P29373 138 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 ATP5OP48047 213 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 RPS6KA3P51812 740 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 AP2B1P63010 937 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 ZNF699Q32M78 642 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 ATG16L1Q676U5 607 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 PYDC1Q8WXC3 89 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 EBF3Q9H4W6 596 aa15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.71■□□□□ 0.11
PCDHGB1-202ENST00000611598 HMX2A2RU54 273 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 BUD23O43709 281 aaKnown RBP15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 GSTT1P30711 240 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 ABCD1P33897 745 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 CPOXP36551 454 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 CDH6P55285 790 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 CDH8P55286 799 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 SLC25A3Q00325 362 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 PDE1BQ01064 536 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 TRMT10BQ6PF06 316 aaKnown RBP15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 RNF111Q6ZNA4 994 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 CAND1Q86VP6 1230 aaKnown RBP15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 EGFL6Q8IUX8 553 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 FNIP1Q8TF40 1166 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 XYLT2Q9H1B5 865 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 USP29Q9HBJ7 922 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 PNPLA8Q9NP80 782 aa15.71■□□□□ 0.1
PCDHGB1-202ENST00000611598 A0A088AWK7 358 aa15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 CHADO15335 359 aa15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 MAFGO15525 162 aa15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 SNNO75324 88 aaPredicted RBP15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 SPAG6O75602 509 aa15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 RNF8O76064 485 aa15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 OATP04181 439 aa15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 POLR2BP30876 1174 aaKnown RBP15.7■□□□□ 0.1
PCDHGB1-202ENST00000611598 CCNFP41002 786 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms