RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 DPEP3Q9H4B8 488 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 PSMC3IPQ9P2W1 217 aaPredicted RBP12.43□□□□□ -0.42
SRRT-213ENST00000611405 SMG5Q9UPR3 1016 aaKnown RBP12.43□□□□□ -0.42
SRRT-213ENST00000611405 DCAF8L1A6NGE4 600 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 PRPF4O43172 522 aaKnown RBP eCLIP12.43□□□□□ -0.42
SRRT-213ENST00000611405 TREHO43280 583 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 TAF6P49848 677 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 GEMIN4P57678 1058 aaKnown RBP12.43□□□□□ -0.42
SRRT-213ENST00000611405 SLC20A2Q08357 652 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 KLHL38Q2WGJ6 581 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 SV2CQ496J9 727 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 SLC9A4Q6AI14 798 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 C1orf228Q6PIY5 440 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 SLC26A9Q7LBE3 791 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 LIMS2Q7Z4I7 341 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 TMEM40Q8WWA1 233 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 ZNF670Q9BS34 389 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 SNRNP25Q9BV90 132 aaKnown RBP12.43□□□□□ -0.42
SRRT-213ENST00000611405 TRABDQ9H4I3 376 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 PAK5Q9P286 719 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 RABGEF1Q9UJ41 708 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 GJD2Q9UKL4 321 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 SCN1AP35498 2009 aa12.43□□□□□ -0.42
SRRT-213ENST00000611405 C17orf102A2RUQ5 167 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 SNX3O60493 162 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 TMEM63AO94886 807 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 PDGFRBP09619 1106 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 GNAT1P11488 350 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 KRT15P19012 456 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 BCAR1P56945 870 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 BASP1P80723 227 aaKnown RBP12.42□□□□□ -0.42
SRRT-213ENST00000611405 IL9RQ01113 521 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 GAD2Q05329 585 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 CBLBQ13191 982 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 ZC3H12AQ5D1E8 599 aaKnown RBP12.42□□□□□ -0.42
SRRT-213ENST00000611405 CAPN12Q6ZSI9 719 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
SRRT-213ENST00000611405 PALM2Q8IXS6 379 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 PQLC3Q8N755 202 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 APPL2Q8NEU8 664 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 CENPIQ92674 756 aaPredicted RBP12.42□□□□□ -0.42
SRRT-213ENST00000611405 FAF2Q96CS3 445 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 HSFY1Q96LI6 401 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 SMC6Q96SB8 1091 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 GPATCH2LQ9NWQ4 482 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 KLK14Q9P0G3 267 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 TCRBV7S3A2A0A539 114 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 SPTLC1O15269 473 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 CHADO15335 359 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 BANF1O75531 89 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 FGFR1P11362 822 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 ATP2A2P16615 1042 aaKnown RBP12.42□□□□□ -0.42
SRRT-213ENST00000611405 ADORA2BP29275 332 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 HDAC4P56524 1084 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 BBS9Q3SYG4 887 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 C3orf62Q6ZUJ4 267 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 FBXO36Q8NEA4 188 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 PCDH19Q8TAB3 1148 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 GDAP1Q8TB36 358 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 LENG1Q96BZ8 264 aaPredicted RBP12.42□□□□□ -0.42
SRRT-213ENST00000611405 FRMD8Q9BZ67 464 aaPredicted RBP12.42□□□□□ -0.42
SRRT-213ENST00000611405 USP29Q9HBJ7 922 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 MLXIPLQ9NP71 852 aa12.42□□□□□ -0.42
SRRT-213ENST00000611405 BCLAF3A2AJT9 711 aaKnown RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 H0YHG0 523 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 OAS1P00973 400 aaKnown RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 CCDC130P13994 396 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 ZFXP17010 805 aaPredicted RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 KCNJ11Q14654 390 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 PKN2Q16513 984 aaKnown RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 PACS2Q86VP3 889 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 TNIP3Q96KP6 325 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 TGS1Q96RS0 853 aaKnown RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 LPIN3Q9BQK8 851 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 C11orf84Q9BUA3 381 aaPredicted RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 ACSS3Q9H6R3 686 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 FGFR1OP2Q9NVK5 253 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 USP15Q9Y4E8 981 aaPredicted RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 HUS1O60921 280 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 FAM163BP0C2L3 166 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 LMO2P25791 158 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 C4orf22Q6V702 233 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 TAB3Q8N5C8 712 aaPredicted RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 TOP6BLQ8N6T0 577 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 DENND1AQ8TEH3 1009 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 PLCD4Q9BRC7 762 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 DHRS4Q9BTZ2 278 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 SSU72Q9NP77 194 aaKnown RBP12.41□□□□□ -0.42
SRRT-213ENST00000611405 RNF19AQ9NV58 838 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 IPPQ9Y573 584 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 TRIP11Q15643 1979 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 KCNN4O15554 427 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 HCRTO43612 131 aa12.41□□□□□ -0.42
SRRT-213ENST00000611405 SUN1O94901 812 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms