RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 HNRNPLP14866 589 aaKnown RBP eCLIP15.75■□□□□ 0.11
CTSA-216ENST00000607212 WASP42768 502 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 TNFRSF4P43489 277 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 AP3M2P53677 418 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 IRX4P78413 519 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 SHC2P98077 582 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 LMAN2Q12907 356 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 ORC1Q13415 861 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 KNOP1Q1ED39 458 aaKnown RBP15.75■□□□□ 0.11
CTSA-216ENST00000607212 LYSMD4Q5XG99 296 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 ACOT1Q86TX2 421 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 BBS7Q8IWZ6 715 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 DEFB119Q8N690 84 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 ZNF513Q8N8E2 541 aaPredicted RBP15.75■□□□□ 0.11
CTSA-216ENST00000607212 OTUB2Q96DC9 234 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 ERLEC1Q96DZ1 483 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 LRRIQ3A6PVS8 624 aaPredicted RBP15.74■□□□□ 0.11
CTSA-216ENST00000607212 CCDC130P13994 396 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 ADORA2BP29275 332 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 P2RY2P41231 377 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 RPL6Q02878 288 aaKnown RBP15.74■□□□□ 0.11
CTSA-216ENST00000607212 GOLGA8FQ08AF8 430 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 GOLGA8DPQ0D2H9 430 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 MESP2Q0VG99 397 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 CUL4BQ13620 913 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 GRAMD4Q6IC98 578 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 SDE2Q6IQ49 451 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 FRMD1Q8N878 549 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 DEFB124Q8NES8 71 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 GTPBP2Q9BX10 602 aaKnown RBP15.74■□□□□ 0.11
CTSA-216ENST00000607212 SLC32A1Q9H598 525 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.11
CTSA-216ENST00000607212 SPHK2Q9NRA0 654 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 FAM49BQ9NUQ9 324 aa15.74■□□□□ 0.11
CTSA-216ENST00000607212 DNAJC17Q9NVM6 304 aaKnown RBP15.74■□□□□ 0.11
CTSA-216ENST00000607212 LSM7Q9UK45 103 aaKnown RBP15.74■□□□□ 0.11
CTSA-216ENST00000607212 PVALEFA0A1B0GWK0 134 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 NEDD8-MDP1E9PL57 170 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 AP5Z1O43299 807 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 TULP3O75386 442 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 HOXB2P14652 356 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 SPINK2P20155 84 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 PIK3CAP42336 1068 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 DPP6P42658 865 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 PTGER3P43115 390 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 KIR2DL1P43626 348 aaPredicted RBP15.73■□□□□ 0.11
CTSA-216ENST00000607212 MAP3K7CLP57077 242 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 BMT2Q1RMZ1 405 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 CEP135Q66GS9 1140 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 CNNM4Q6P4Q7 775 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 TPGS1Q6ZTW0 290 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 SYT12Q8IV01 421 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 HDDC3Q8N4P3 179 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 OLIG1Q8TAK6 271 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 SLC2A14Q8TDB8 520 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 XPO6Q96QU8 1125 aaKnown RBP15.73■□□□□ 0.11
CTSA-216ENST00000607212 XYLT2Q9H1B5 865 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 FBXO44Q9H4M3 255 aa15.73■□□□□ 0.11
CTSA-216ENST00000607212 TLR8Q9NR97 1041 aaKnown RBP15.73■□□□□ 0.11
CTSA-216ENST00000607212 ADAMTS9Q9P2N4 1935 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 TNFRSF10BO14763 440 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 TLR5O60602 858 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 ADAM23O75077 832 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 KIF20AO95235 890 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 PI4KAP42356 2102 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 KIAA1211LQ6NV74 962 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 TMEM25Q86YD3 366 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 C12orf56Q8IXR9 622 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 SPRYD3Q8NCJ5 442 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 PLEKHO2Q8TD55 490 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 BBS2Q9BXC9 721 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 COMMD8Q9NX08 183 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 SERTAD1Q9UHV2 236 aa15.72■□□□□ 0.11
CTSA-216ENST00000607212 MBD1Q9UIS9 605 aaPredicted RBP15.72■□□□□ 0.11
CTSA-216ENST00000607212 TNRC6BQ9UPQ9 1833 aaKnown RBP15.71■□□□□ 0.11
CTSA-216ENST00000607212 C1QTNF9BB2RNN3 333 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 CDX4O14627 284 aaPredicted RBP15.71■□□□□ 0.11
CTSA-216ENST00000607212 HOXC11O43248 304 aaPredicted RBP15.71■□□□□ 0.11
CTSA-216ENST00000607212 PROS1P07225 676 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 C1QTNF9P0C862 333 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 FAM200BP0CF97 657 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 CEACAM1P13688 526 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 ENGP17813 658 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 CSRP1P21291 193 aaKnown RBP15.71■□□□□ 0.11
CTSA-216ENST00000607212 ITPKAP23677 461 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 TUBP50607 506 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 NDST1P52848 882 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 SGSM1Q2NKQ1 1148 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 UNQ6494/PRO21346Q6UXR6 183 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 SLC36A4Q6YBV0 504 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 HSCBQ8IWL3 235 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 CHPFQ8IZ52 775 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 FUKQ8N0W3 1084 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 TERB1Q8NA31 727 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 PARD3BQ8TEW8 1205 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 BHMTQ93088 406 aa15.71■□□□□ 0.11
CTSA-216ENST00000607212 ZFRQ96KR1 1074 aaKnown RBP15.71■□□□□ 0.11
CTSA-216ENST00000607212 SMOQ99835 787 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms