RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 DHCR24Q15392 516 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 ZC3H14Q6PJT7 736 aaKnown RBP12.96□□□□□ -0.33
CTSA-210ENST00000606000 RRAGAQ7L523 313 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 PIGZQ86VD9 579 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 BBS7Q8IWZ6 715 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 SPEM1Q8N4L4 309 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 ZBTB44Q8NCP5 570 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 TFAP2BQ92481 460 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 NDRG1Q92597 394 aaKnown RBP12.96□□□□□ -0.33
CTSA-210ENST00000606000 CD101Q93033 1021 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
CTSA-210ENST00000606000 ZSWIM1Q9BR11 485 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 NACA2Q9H009 215 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 PNPLA8Q9NP80 782 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 TLR8Q9NR97 1041 aaKnown RBP12.96□□□□□ -0.33
CTSA-210ENST00000606000 ZSCAN32Q9NX65 697 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 RWDD2AQ9UIY3 292 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 TSPAN16Q9UKR8 245 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 USP34Q70CQ2 3546 aa12.96□□□□□ -0.33
CTSA-210ENST00000606000 CHURC1-FNTBB4DL54 471 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 LILRB5O75023 590 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
CTSA-210ENST00000606000 AFPP02771 609 aaKnown RBP12.95□□□□□ -0.34
CTSA-210ENST00000606000 RARGP13631 454 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
CTSA-210ENST00000606000 SLC6A11P48066 632 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 FNTBP49356 437 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 APBA1Q02410 837 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 PDE4CQ08493 712 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
CTSA-210ENST00000606000 TMEM270Q6UE05 265 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 IRF2BP1Q8IU81 584 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 CREBRFQ8IUR6 639 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 TTC39CQ8N584 583 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 SUMF1Q8NBK3 374 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 KREMEN1Q96MU8 473 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
CTSA-210ENST00000606000 INTS2Q9H0H0 1204 aaKnown RBP12.95□□□□□ -0.34
CTSA-210ENST00000606000 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 LMBRD1Q9NUN5 540 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTSA-210ENST00000606000 NAGPAQ9UK23 515 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 PCDHB4Q9Y5E5 795 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 PCDHGA2Q9Y5H1 932 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTSA-210ENST00000606000 USP3Q9Y6I4 520 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 DMDP11532 3685 aa12.95□□□□□ -0.34
CTSA-210ENST00000606000 E2F8A0AVK6 867 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 O00370 1275 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 PIK3R2O00459 728 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 PMM2O15305 246 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 GREM1O60565 184 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 BRD2P25440 801 aaKnown RBP12.94□□□□□ -0.34
CTSA-210ENST00000606000 PXNP49023 591 aaPredicted RBP12.94□□□□□ -0.34
CTSA-210ENST00000606000 TKTL1P51854 596 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 SEC13P55735 322 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 KDSRQ06136 332 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 LPAL2Q16609 132 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 SGO2Q562F6 1265 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 RAB41Q5JT25 222 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 LY6G5CQ5SRR4 150 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 GJB7Q6PEY0 223 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 RHBDF2Q6PJF5 856 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 BHLHA9Q7RTU4 235 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 CCDC186Q7Z3E2 898 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTSA-210ENST00000606000 DCLK2Q8N568 766 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 RBBP8NLQ8NC74 664 aaPredicted RBP12.94□□□□□ -0.34
CTSA-210ENST00000606000 EHBP1Q8NDI1 1231 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 ATRIPQ8WXE1 791 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 ULBP1Q9BZM6 244 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 NUP62CLQ9H1M0 184 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 EML5Q05BV3 1969 aa12.94□□□□□ -0.34
CTSA-210ENST00000606000 MYOFQ9NZM1 2061 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 P4HA2O15460 535 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 GABBR2O75899 941 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 GNA14O95837 355 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 VDRP11473 427 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 ADH5P11766 374 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 DRD1P21728 446 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 ATP5C1P36542 298 aaKnown RBP12.93□□□□□ -0.34
CTSA-210ENST00000606000 BCAT1P54687 386 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 YWHAEP62258 255 aaKnown RBP12.93□□□□□ -0.34
CTSA-210ENST00000606000 AMPD2Q01433 879 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 ADIGQ0VDE8 80 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 NR1H3Q13133 447 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 C10orf120Q5SQS8 335 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 CLEC17AQ6ZS10 378 aa12.93□□□□□ -0.34
CTSA-210ENST00000606000 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms