RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 ERVK-21P61565 698 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 TSPY1Q01534 308 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SMARCB1Q12824 385 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 RAB33AQ14088 237 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 MAPRE1Q15691 268 aaKnown RBP11.31□□□□□ -0.6
SCNM1-207ENST00000602841 PSMD5Q16401 504 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 DDR2Q16832 855 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 CCDC14Q49A88 953 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 ARTNQ5T4W7 220 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SH3PXD2AQ5TCZ1 1133 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 LIN9Q5TKA1 542 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SDHAF4Q5VUM1 108 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 DAB2IPQ5VWQ8 1189 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 ANKS1BQ7Z6G8 1248 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SCD5Q86SK9 330 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 TXLNBQ8N3L3 684 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 EMC1Q8N766 993 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 STKLD1Q8NE28 680 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SCAMP5Q8TAC9 235 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 FNIP1Q8TF40 1166 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 GDPD5Q8WTR4 605 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 CENPIQ92674 756 aaPredicted RBP11.31□□□□□ -0.6
SCNM1-207ENST00000602841 ALG3Q92685 438 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 KRT35Q92764 455 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SMARCD1Q96GM5 515 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SLC2A13Q96QE2 648 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 MED10Q9BTT4 135 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 DDX23Q9BUQ8 820 aaKnown RBP11.31□□□□□ -0.6
SCNM1-207ENST00000602841 ULBP1Q9BZM6 244 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 METTL5Q9NRN9 209 aaKnown RBP11.31□□□□□ -0.6
SCNM1-207ENST00000602841 FNIP2Q9P278 1114 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 MUTYHQ9UIF7 546 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 LZTS1Q9Y250 596 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 JRKLQ9Y4A0 524 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 IRAK3Q9Y616 596 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
SCNM1-207ENST00000602841 RIF1Q5UIP0 2472 aaKnown RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 CARNS1A5YM72 827 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 YJEFN3A6XGL0 299 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 E7ENQ6 273 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 GOLGA8SH3BPF8 625 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 GRM6O15303 877 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 TEX28O15482 410 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 SRGAP2O75044 1071 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 ENDOD1O94919 500 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 LCP1P13796 627 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 CTNNA2P26232 953 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 PPM1AP35813 382 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 MARCKSL1P49006 195 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 TKTL1P51854 596 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 TAS2R40P59535 323 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 USP46P62068 366 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 PITX1P78337 314 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 MESDQ14696 234 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 PTPROQ16827 1216 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 SPOUT1Q5T280 376 aaKnown RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 TXNRD3NBQ6F5E7 133 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 OR6B2Q6IFH4 312 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 VSTM1Q6UX27 236 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 ZDHHC17Q8IUH5 632 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 COG1Q8WTW3 980 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 ATOH1Q92858 354 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 PBXIP1Q96AQ6 731 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 TMEM169Q96HH4 297 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 PGLYRP2Q96PD5 576 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 MCEEQ96PE7 176 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 KLHL5Q96PQ7 755 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 NAPGQ99747 312 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 MIS12Q9H081 205 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 MRPL47Q9HD33 250 aaKnown RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 DMAP1Q9NPF5 467 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 ASNSD1Q9NWL6 643 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 OSER1Q9NX31 292 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 AFF4Q9UHB7 1163 aaKnown RBP11.3□□□□□ -0.6
SCNM1-207ENST00000602841 ANAPC7Q9UJX3 599 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 CEP83Q9Y592 693 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 PCDHB5Q9Y5E4 795 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 SCINQ9Y6U3 715 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 CHD8Q9HCK8 2581 aa11.3□□□□□ -0.6
SCNM1-207ENST00000602841 HIDE1A8MVS5 230 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-207ENST00000602841 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-207ENST00000602841 C2CD2LO14523 706 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 LRCH4O75427 683 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 CNPP09543 421 aaKnown RBP11.29□□□□□ -0.6
SCNM1-207ENST00000602841 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 ATF2P15336 505 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 HMGA1P17096 107 aaKnown RBP11.29□□□□□ -0.6
SCNM1-207ENST00000602841 IL1R2P27930 398 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 CASQ1P31415 396 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 MAN1A1P33908 653 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 SLC5A3P53794 718 aa11.29□□□□□ -0.6
SCNM1-207ENST00000602841 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms