RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 NDEL1Q9GZM8 345 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 TUT1Q9H6E5 874 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 MINDY3Q9H8M7 445 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 PPARGC1AQ9UBK2 798 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 NDC80O14777 642 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 WEE2P0C1S8 567 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 C6orf222P0C671 652 aaPredicted RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 ITGA8P53708 1063 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 NOP14P78316 857 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 LAMTOR4Q0VGL1 99 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 DLG1Q12959 904 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 MOGSQ13724 837 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 CELF3Q5SZQ8 465 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 SLC47A2Q86VL8 602 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 C12orf65Q9H3J6 166 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 KCNH4Q9UQ05 1017 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 DOCK3Q8IZD9 2030 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 ARHGAP10A1A4S6 786 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 HNRNPCL1O60812 293 aaKnown RBP15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 EEF1DP3Q658K8 133 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 GSTA5Q7RTV2 222 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 SLC15A3Q8IY34 581 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 OR5B17Q8NGF7 314 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 SRPK1Q96SB4 655 aaKnown RBP15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 TUBB6Q9BUF5 446 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 TMEM98Q9Y2Y6 226 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 HEMK1Q9Y5R4 338 aaPredicted RBP15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 EIF3DO15371 548 aaKnown RBP eCLIP15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 PIAS1O75925 651 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 PGK1P00558 417 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 ATF2P15336 505 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 VCLP18206 1134 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 ZNF568Q3ZCX4 644 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 ZNF75CPQ92670 426 aaPredicted RBP15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 THAP2Q9H0W7 228 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 LIN28AQ9H9Z2 209 aaKnown RBP15.97■□□□□ 0.15
PPFIA3-206ENST00000602655 SOCS7O14512 581 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 PTGIRP43119 386 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 PDE1BQ01064 536 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 NFX1Q12986 1120 aaKnown RBP15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 TAS1R3Q7RTX0 852 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 ATG4AQ8WYN0 398 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 ARHGEF26Q96DR7 871 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 RILPQ96NA2 401 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 GANQ9H2C0 597 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 MAP3K20Q9NYL2 800 aaKnown RBP15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 SUN2Q9UH99 717 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 KIAA0100Q14667 2235 aaKnown RBP15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 H3BRB1 525 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 CD19P15391 556 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 NCOA4Q13772 614 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 ACAD11Q709F0 780 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 ICA1LQ8NDH6 482 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 TRAIPQ9BWF2 469 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 MTMR12Q9C0I1 747 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 DRC3Q9H069 523 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 STXBP5LQ9Y2K9 1186 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 GREB1LQ9C091 1923 aaPredicted RBP15.96■□□□□ 0.15
PPFIA3-206ENST00000602655 DDX3YO15523 660 aaKnown RBP15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 PRKCBP05771 671 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 NAT1P18440 290 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 CHN2P52757 468 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 AQP4P55087 323 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 KIF22Q14807 665 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 SLC1A5Q15758 541 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 PKN2Q16513 984 aaKnown RBP15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 MAPK6Q16659 721 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 NADK2Q4G0N4 442 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 THOC7Q6I9Y2 204 aaKnown RBP15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 TMEM270Q6UE05 265 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 SLX1AQ9BQ83 275 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 MROH8Q9H579 483 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 USTQ9Y2C2 406 aa15.96■□□□□ 0.14
PPFIA3-206ENST00000602655 MYOCOSA0A1B0GUC4 107 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 RPL5P46777 297 aaKnown RBP15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 CD97P48960 835 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 PLEKHH3Q7Z736 793 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 CPNE8Q86YQ8 564 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 GPD1LQ8N335 351 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 GAB3Q8WWW8 586 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 CNBD2Q96M20 576 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 PRPF18Q99633 342 aaKnown RBP15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 ANLNQ9NQW6 1124 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 KLK14Q9P0G3 267 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 APEX2Q9UBZ4 518 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 EFR3BQ9Y2G0 817 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 TRIM17Q9Y577 477 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 C2CD2LO14523 706 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 ATP2A1O14983 1001 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 AOC2O75106 756 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 LGALS2P05162 132 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 RXRGP48443 463 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 EIF2B2P49770 351 aaKnown RBP15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 GTF2BQ00403 316 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 CYTH1Q15438 398 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 PPP1R2P3Q6NXS1 205 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 CPA5Q8WXQ8 436 aa15.95■□□□□ 0.14
PPFIA3-206ENST00000602655 ART4Q93070 314 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms