RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 E2F8A0AVK6 867 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 K7ELQ4 463 aaPredicted RBP18.81■□□□□ 0.6
SSBP4-207ENST00000600244 PCDHGA12O60330 932 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 IL12RB1P42701 662 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 LIG4P49917 911 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 CLDN6P56747 220 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 ORC2Q13416 577 aaPredicted RBP18.81■□□□□ 0.6
SSBP4-207ENST00000600244 KIF19Q2TAC6 998 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 BTBD8Q5XKL5 378 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 KIAA1324Q6UXG2 1013 aaKnown RBP18.81■□□□□ 0.6
SSBP4-207ENST00000600244 KCNK18Q7Z418 384 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 SPATA2LQ8IUW3 424 aaPredicted RBP18.81■□□□□ 0.6
SSBP4-207ENST00000600244 C4orf32Q8N8J7 132 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 TMEM176AQ96HP8 235 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 CEP295NLQ96MC4 621 aa18.81■□□□□ 0.6
SSBP4-207ENST00000600244 KCNJ18B7U540 433 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 TRIM66O15016 1216 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 JAK2O60674 1132 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 HNF1BP35680 557 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 PPP3CCP48454 512 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 CSNK1EP49674 416 aaKnown RBP18.8■□□□□ 0.6
SSBP4-207ENST00000600244 CSRP3P50461 194 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 NCKAP1LP55160 1127 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 RAD51AP2Q09MP3 1159 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 TARDBPQ13148 414 aaKnown RBP eCLIP18.8■□□□□ 0.6
SSBP4-207ENST00000600244 SF3A1Q15459 793 aaKnown RBP18.8■□□□□ 0.6
SSBP4-207ENST00000600244 SLC39A4Q6P5W5 647 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 FAM171BQ6P995 826 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 DDX42Q86XP3 938 aaKnown RBP eCLIP18.8■□□□□ 0.6
SSBP4-207ENST00000600244 ENGASEQ8NFI3 743 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 SNX29Q8TEQ0 813 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 MSTO1Q9BUK6 570 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 EIF2B4Q9UI10 523 aaKnown RBP18.8■□□□□ 0.6
SSBP4-207ENST00000600244 SNX11Q9Y5W9 270 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 SLCO1B1Q9Y6L6 691 aa18.8■□□□□ 0.6
SSBP4-207ENST00000600244 PRRT4C9JH25 899 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 GFRA2O00451 464 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 HNRNPDLO14979 420 aaKnown RBP18.79■□□□□ 0.6
SSBP4-207ENST00000600244 MYL7Q01449 175 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 CCDC173Q0VFZ6 552 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 KCNH2Q12809 1159 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 DENND5BQ6ZUT9 1274 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 OSTM1Q86WC4 334 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 TMEM25Q86YD3 366 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 IGSF22Q8N9C0 903 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 DUSP9Q99956 384 aaKnown RBP18.79■□□□□ 0.6
SSBP4-207ENST00000600244 SPHK2Q9NRA0 654 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 PCDHB6Q9Y5E3 794 aa18.79■□□□□ 0.6
SSBP4-207ENST00000600244 COL12A1Q99715 3063 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 H0YCG3 227 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 GABRDO14764 452 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 HCRTO43612 131 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 SLC28A2O43868 658 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 NTRK1P04629 796 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 ACOT2P49753 483 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 LY6DQ14210 128 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 VSTM1Q6UX27 236 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 ERICH1Q86X53 443 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 TMEM86AQ8N2M4 240 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 ZFRQ96KR1 1074 aaKnown RBP18.78■□□□□ 0.6
SSBP4-207ENST00000600244 FTSJ1Q9UET6 329 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 TEX15Q9BXT5 2789 aa18.78■□□□□ 0.6
SSBP4-207ENST00000600244 MYH11P35749 1972 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 WASH3PC4AMC7 463 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 KCNK3O14649 394 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 PAPSS1O43252 624 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-207ENST00000600244 IGLV3-19P01714 112 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 C1SP09871 688 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 CDK4P11802 303 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 PNPLA4P41247 253 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 AFF3P51826 1226 aaKnown RBP18.77■□□□□ 0.6
SSBP4-207ENST00000600244 GRAMD4Q6IC98 578 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 TTC9Q92623 222 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 IGSF8Q969P0 613 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 INTS4Q96HW7 963 aaKnown RBP18.77■□□□□ 0.6
SSBP4-207ENST00000600244 ZNF560Q96MR9 790 aa18.77■□□□□ 0.6
SSBP4-207ENST00000600244 MKRN2Q9H000 416 aaKnown RBP18.77■□□□□ 0.6
SSBP4-207ENST00000600244 TMEM131Q92545 1883 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 BRINP1O60477 761 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 HUS1O60921 280 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 ATP2C2O75185 946 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 MBL2P11226 248 aaPredicted RBP18.76■□□□□ 0.59
SSBP4-207ENST00000600244 OXTRP30559 389 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 ACTN2P35609 894 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 GRIK1P39086 918 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 CCT8P50990 548 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 TPMTP51580 245 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 NOP14P78316 857 aaKnown RBP18.76■□□□□ 0.59
SSBP4-207ENST00000600244 HMGN5P82970 282 aaKnown RBP18.76■□□□□ 0.59
SSBP4-207ENST00000600244 ANO4Q32M45 955 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 FUT11Q495W5 492 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 COLEC12Q5KU26 742 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 USP49Q70CQ1 688 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 BBS7Q8IWZ6 715 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 OSGEPQ9NPF4 335 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 EHD2Q9NZN4 543 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 MAGEC2Q9UBF1 373 aaPredicted RBP18.76■□□□□ 0.59
SSBP4-207ENST00000600244 ANKRD6Q9Y2G4 727 aa18.76■□□□□ 0.59
SSBP4-207ENST00000600244 MYLKQ15746 1914 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms