RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 GDE1Q9NZC3 331 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
TGFB1-204ENST00000600196 CYTH4Q9UIA0 394 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 USTQ9Y2C2 406 aa12.9□□□□□ -0.34
TGFB1-204ENST00000600196 TCRBV5S1A1TA0A578 114 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 TULP2O00295 520 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 CCL16O15467 120 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 RFPL2O75678 378 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 GABBR2O75899 941 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 F9P00740 461 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 CYP1A2P05177 515 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 TCF3P15923 654 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
TGFB1-204ENST00000600196 MAGEA1P43355 309 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 HADHBP55084 474 aaKnown RBP12.89□□□□□ -0.35
TGFB1-204ENST00000600196 GFPT1Q06210 699 aaPredicted RBP12.89□□□□□ -0.35
TGFB1-204ENST00000600196 ADIGQ0VDE8 80 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 NNTQ13423 1086 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
TGFB1-204ENST00000600196 PRSS36Q5K4E3 855 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 LLGL2Q6P1M3 1020 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 OLFML1Q6UWY5 402 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 PASD1Q8IV76 773 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 SCUBE3Q8IX30 993 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 SCAMP5Q8TAC9 235 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
TGFB1-204ENST00000600196 E2F7Q96AV8 911 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 SLC2A13Q96QE2 648 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 ULBP1Q9BZM6 244 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 TASP1Q9H6P5 420 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 UBE2ZQ9H832 354 aaPredicted RBP12.89□□□□□ -0.35
TGFB1-204ENST00000600196 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
TGFB1-204ENST00000600196 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 PJA2O43164 708 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 TBX10O75333 385 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 SOAT2O75908 522 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 MTA2O94776 668 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 OLFM2O95897 454 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 CALCAP01258 141 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 LTFP02788 710 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 KRT3P12035 628 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 LCP1P13796 627 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 NOS2P35228 1153 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 GPR15P49685 360 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 RGS7P49802 495 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 YWHAGP61981 247 aaKnown RBP eCLIP12.88□□□□□ -0.35
TGFB1-204ENST00000600196 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 OR6B2Q6IFH4 312 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 GPRIN1Q7Z2K8 1008 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 NT5C3BQ969T7 300 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 PGAP3Q96FM1 320 aaPredicted RBP12.88□□□□□ -0.35
TGFB1-204ENST00000600196 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
TGFB1-204ENST00000600196 OBP2AQ9NY56 170 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 TMEM59LQ9UK28 342 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 STAP1Q9ULZ2 295 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 PAXBP1Q9Y5B6 917 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 PCDHA13Q9Y5I0 950 aa12.88□□□□□ -0.35
TGFB1-204ENST00000600196 MYH10P35580 1976 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 LINC01565O15544 149 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 CCP110O43303 1012 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 USP17L7P0C7H9 530 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 FSHRP23945 695 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 GABRR2P28476 465 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 MATKP42679 507 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 PTPN9P43378 593 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 GALCP54803 685 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 USP46P62068 366 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 SLC7A9P82251 487 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 CCZ1BP86790 482 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 CCZ1P86791 482 aaPredicted RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 MAMLD1Q13495 774 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 IFI16Q16666 785 aaKnown RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 RAD9BQ6WBX8 426 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 GAREM2Q75VX8 874 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 BHLHA9Q7RTU4 235 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 GRASPQ7Z6J2 395 aaPredicted RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 SCD5Q86SK9 330 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 TMEM150AQ86TG1 271 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 DDX42Q86XP3 938 aaKnown RBP eCLIP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 C11orf70Q9BRQ4 267 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 DDX23Q9BUQ8 820 aaKnown RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 SELENOOQ9BVL4 669 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 KIF9Q9HAQ2 790 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 TRPV4Q9HBA0 871 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms