RNA–Protein interactions for RNA: ENST00000600032.5

FARP1-228, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-228ENST00000600032 BDNFP23560 247 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 HOXA6P31267 233 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 HOXD13P35453 343 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 KRT85P78386 507 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 SATB1Q01826 763 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 DNM1Q05193 864 aaKnown RBP9.8□□□□□ -0.84
FARP1-228ENST00000600032 BIRC3Q13489 604 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 CUL4BQ13620 913 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 WDR72Q3MJ13 1102 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 FBXO43Q4G163 708 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 SDHAF4Q5VUM1 108 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 TXNDC11Q6PKC3 985 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 PRR23BQ6ZRT6 265 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 DGLUCYQ7Z3D6 616 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 OSCP1Q8WVF1 389 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 TNIP3Q96KP6 325 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 SLITRK1Q96PX8 696 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 DNAI2Q9GZS0 605 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 NUCKS1Q9H1E3 243 aaKnown RBP9.8□□□□□ -0.84
FARP1-228ENST00000600032 EBF3Q9H4W6 596 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 RBM12Q9NTZ6 932 aaKnown RBP9.8□□□□□ -0.84
FARP1-228ENST00000600032 DUS2Q9NX74 493 aaKnown RBP9.8□□□□□ -0.84
FARP1-228ENST00000600032 RCOR1Q9UKL0 485 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 USP18Q9UMW8 372 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 SLC8A2Q9UPR5 921 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 CCL26Q9Y258 94 aa9.8□□□□□ -0.84
FARP1-228ENST00000600032 A8MXQ7 604 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 TRDMT1O14717 391 aaKnown RBP9.79□□□□□ -0.84
FARP1-228ENST00000600032 SLC9A3R1O14745 358 aaPredicted RBP9.79□□□□□ -0.84
FARP1-228ENST00000600032 ATP2C2O75185 946 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 TADA3O75528 432 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 NFATC1O95644 943 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 RETP07949 1114 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 TCF3P15923 654 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 HDCP19113 662 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 MX2P20592 715 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 CMA1P23946 247 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 LMO2P25791 158 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 NOP14P78316 857 aaKnown RBP9.79□□□□□ -0.84
FARP1-228ENST00000600032 USP4Q13107 963 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 SIM2Q14190 667 aaPredicted RBP9.79□□□□□ -0.84
FARP1-228ENST00000600032 ZNF77Q15935 545 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 ZNF699Q32M78 642 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 TMEM196Q5HYL7 178 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 MDH1BQ5I0G3 518 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 TDRD10Q5VZ19 366 aaKnown RBP9.79□□□□□ -0.84
FARP1-228ENST00000600032 Q6ZS52 159 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 CEP68Q76N32 757 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.79□□□□□ -0.84
FARP1-228ENST00000600032 DDX42Q86XP3 938 aaKnown RBP eCLIP9.79□□□□□ -0.84
FARP1-228ENST00000600032 SLC9A9Q8IVB4 645 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 DCLK2Q8N568 766 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 KIAA1958Q8N8K9 716 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 B3GALNT2Q8NCR0 500 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 STKLD1Q8NE28 680 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 TTC16Q8NEE8 873 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 PDZD8Q8NEN9 1154 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 TMEM174Q8WUU8 243 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 PCED1BQ96HM7 432 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 FAM84AQ96KN4 292 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 SPATA32Q96LK8 384 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 C8orf48Q96LL4 319 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 VRTNQ9H8Y1 702 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 CRTAC1Q9NQ79 661 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 HPS4Q9NQG7 708 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 ARHGAP26Q9UNA1 814 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 FRMD4BQ9Y2L6 1034 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 PTPRDP23468 1912 aa9.79□□□□□ -0.84
FARP1-228ENST00000600032 HELZP42694 1942 aaKnown RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 GREB1Q4ZG55 1949 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 ANAPC1Q9H1A4 1944 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 CCDC163A0A0D9SF12 145 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 CHURC1-FNTBB4DL54 471 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 F8VP50 259 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 PDXKO00764 312 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 HCRTO43612 131 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 CALUO43852 315 aaPredicted RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 RTN3O95197 1032 aaPredicted RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 CST3P01034 146 aaPredicted RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 RPN1P04843 607 aaKnown RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 PFKFB1P16118 471 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 PTPN1P18031 435 aaKnown RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 CASP1P29466 404 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 FNTBP49356 437 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 CENPCQ03188 943 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 NCOA4Q13772 614 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 ZNF667Q5HYK9 610 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 TRIM68Q6AZZ1 485 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 WDR5BQ86VZ2 330 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 CAMKK1Q8N5S9 505 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 BEND7Q8N7W2 519 aaPredicted RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 ARL14EPQ8N8R7 260 aaPredicted RBP9.78□□□□□ -0.84
FARP1-228ENST00000600032 SH3RF2Q8TEC5 729 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 PARD3BQ8TEW8 1205 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 OVCA2Q8WZ82 227 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 TAF4BQ92750 862 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 CD101Q93033 1021 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 ACDQ96AP0 544 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 RMDN1Q96DB5 314 aa9.78□□□□□ -0.84
FARP1-228ENST00000600032 PAGE5Q96GU1 130 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms