RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 ERICH1Q86X53 443 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 DDX42Q86XP3 938 aaKnown RBP eCLIP17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 ZSCAN18Q8TBC5 510 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 SLC20A1Q8WUM9 679 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 ING5Q8WYH8 240 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 ELSPBP1Q96BH3 223 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 HAUS4Q9H6D7 363 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 SYNCQ9H7C4 482 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 ZFP14Q9HCL3 533 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 ABCC13Q9NSE7 274 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 OLA1Q9NTK5 396 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 GMIPQ9P107 970 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 STRIP2Q9ULQ0 834 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 C2orf16Q68DN1 1984 aa17.39■□□□□ 0.37
SHKBP1-219ENST00000599575 AKR1B15C9JRZ8 316 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 E5RJQ4 531 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 MFAP3LO75121 409 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 CKMP06732 381 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 UNGP13051 313 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 LCP1P13796 627 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 GJA1P17302 382 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 TNFAIP3P21580 790 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 MMP8P22894 467 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 NSFP46459 744 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 RGS7P49802 495 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 YWHAGP61981 247 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 CYP4F8P98187 520 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 HTR4Q13639 388 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 CLEC16AQ2KHT3 1053 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 FAM78AQ5JUQ0 283 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 EFHC1Q5JVL4 640 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 TMC6Q7Z403 805 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 PASD1Q8IV76 773 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 ARID3BQ8IVW6 561 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 GJD3Q8N144 294 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 CELF5Q8N6W0 485 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 MAB21L3Q8N8X9 362 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 ADAMTS19Q8TE59 1207 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 DEPDC1BQ8WUY9 529 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 C18orf8Q96DM3 657 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 VCPIP1Q96JH7 1222 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 CPXM1Q96SM3 734 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 TDP1Q9NUW8 608 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 WDR35Q9P2L0 1181 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 IMPACTQ9P2X3 320 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 CYTH4Q9UIA0 394 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 NAGPAQ9UK23 515 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 ARHGAP26Q9UNA1 814 aa17.38■□□□□ 0.37
SHKBP1-219ENST00000599575 PATJQ8NI35 1801 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 GOLGA6L3A6NEY3 463 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 TLR5O60602 858 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 ABL1P00519 1130 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 ATP5C1P36542 298 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 CDK17Q00537 523 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 BTBD8Q5XKL5 378 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 HGSNATQ68CP4 663 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 ARCQ7LC44 396 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 SCD5Q86SK9 330 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 PHF13Q86YI8 300 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 SCUBE3Q8IX30 993 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 ZSWIM3Q96MP5 696 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 NACA2Q9H009 215 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 KCNK12Q9HB15 430 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 ABHD10Q9NUJ1 306 aa17.37■□□□□ 0.37
SHKBP1-219ENST00000599575 C5orf42Q9H799 3197 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 A0A1W2PQH9 124 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 SSU72P8A0A1W2PR75 194 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 YJEFN3A6XGL0 299 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 E7ENQ6 273 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 DPYSL4O14531 572 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 PAPSS1O43252 624 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 GABBR2O75899 941 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 LTFP02788 710 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 CALB1P05937 261 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 RARGP13631 454 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 SSTR3P32745 418 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 KPNA1P52294 538 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 GSCP56915 257 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 YWHAZP63104 245 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 C1QBPQ07021 282 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 GOLGA8FQ08AF8 430 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 GOLGA8DPQ0D2H9 430 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 PTPN20Q4JDL3 420 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 TDRD12Q587J7 1177 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 STXBP5Q5T5C0 1151 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 NAA35Q5VZE5 725 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 BSPRYQ5W0U4 402 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 E4F1Q66K89 784 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 SLC26A9Q7LBE3 791 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 BHLHA9Q7RTU4 235 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 RNF139Q8WU17 664 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 UHRF1Q96T88 793 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 NMUR1Q9HB89 426 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 POPDC2Q9HBU9 364 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 TRPC7Q9HCX4 862 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 LIMD1Q9UGP4 676 aa17.36■□□□□ 0.37
SHKBP1-219ENST00000599575 DNMT3LQ9UJW3 386 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms