RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 ACO1P21399 889 aaKnown RBP24.29■■□□□ 1.48
SSBP4-205ENST00000598159 ATP5C1P36542 298 aaKnown RBP24.29■■□□□ 1.48
SSBP4-205ENST00000598159 GAB4Q2WGN9 574 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 CBWD6Q4V339 395 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 CBWD3Q5JTY5 395 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 CBWD5Q5RIA9 395 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 ISM2Q6H9L7 571 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 SYT13Q7L8C5 426 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 RPLP0P6Q8NHW5 317 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 CEP63Q96MT8 703 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 UBXN6Q9BZV1 441 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 CIZ1Q9ULV3 898 aaPredicted RBP24.29■■□□□ 1.48
SSBP4-205ENST00000598159 MYOFQ9NZM1 2061 aa24.28■■□□□ 1.48
SSBP4-205ENST00000598159 EIF2DP41214 584 aaKnown RBP24.28■■□□□ 1.48
SSBP4-205ENST00000598159 KIF11P52732 1056 aa24.28■■□□□ 1.48
SSBP4-205ENST00000598159 GPRIN1Q7Z2K8 1008 aa24.28■■□□□ 1.48
SSBP4-205ENST00000598159 ACDQ96AP0 544 aa24.28■■□□□ 1.48
SSBP4-205ENST00000598159 PNKPQ96T60 521 aa24.28■■□□□ 1.48
SSBP4-205ENST00000598159 CYLDQ9NQC7 956 aa24.28■■□□□ 1.48
SSBP4-205ENST00000598159 GPR179Q6PRD1 2367 aa24.28■■□□□ 1.48
SSBP4-205ENST00000598159 A0A0A0MRY4 1105 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 K7EQS6 105 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 RETP07949 1114 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 PGFP49763 221 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 PSEN1P49768 467 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 RAD23BP54727 409 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 GAD2Q05329 585 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 LPAL2Q16609 132 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 FOXR2Q6PJQ5 311 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 CEP68Q76N32 757 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 SLC4A11Q8NBS3 891 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 SLC35C1Q96A29 364 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 JAKMIP2Q96AA8 810 aa24.27■■□□□ 1.48
SSBP4-205ENST00000598159 KLF16Q9BXK1 252 aaPredicted RBP24.27■■□□□ 1.48
SSBP4-205ENST00000598159 SCAMP3O14828 347 aaKnown RBP24.26■■□□□ 1.47
SSBP4-205ENST00000598159 ADH5P11766 374 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 CD44P16070 742 aaKnown RBP24.26■■□□□ 1.47
SSBP4-205ENST00000598159 HOXC13P31276 330 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 SLC6A11P48066 632 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 YWHAEP62258 255 aaKnown RBP24.26■■□□□ 1.47
SSBP4-205ENST00000598159 GOLGA8FQ08AF8 430 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 GOLGA8DPQ0D2H9 430 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 SRSF5Q13243 272 aaKnown RBP24.26■■□□□ 1.47
SSBP4-205ENST00000598159 ARHGAP17Q68EM7 881 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 KLHDC10Q6PID8 442 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 HTR3DQ70Z44 454 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 ZNF276Q8N554 614 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 USP33Q8TEY7 942 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 USP3Q9Y6I4 520 aa24.26■■□□□ 1.47
SSBP4-205ENST00000598159 ZNF292O60281 2723 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 BICDL2A1A5D9 508 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-205ENST00000598159 PMM2O15305 246 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 CYP26A1O43174 497 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 LRP3O75074 770 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 GADD45BO75293 160 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-205ENST00000598159 TBX18O95935 607 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 APODP05090 189 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 PXNP49023 591 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-205ENST00000598159 SLC8A3P57103 927 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 MRPS21P82921 87 aaKnown RBP24.25■■□□□ 1.47
SSBP4-205ENST00000598159 FOXK2Q01167 660 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 CUL2Q13617 745 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 DMC1Q14565 340 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 PREPLQ4J6C6 727 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-205ENST00000598159 LY6G5CQ5SRR4 150 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 CCDC186Q7Z3E2 898 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 TADA2BQ86TJ2 420 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 GAB3Q8WWW8 586 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 ARID3AQ99856 593 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 OSER1Q9NX31 292 aa24.25■■□□□ 1.47
SSBP4-205ENST00000598159 MYO16Q9Y6X6 1858 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 A0A1W2PQH9 124 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 PPP1R3GB7ZBB8 358 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 RARGP13631 454 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 TGM1P22735 817 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 TBXAS1P24557 533 aaPredicted RBP24.24■■□□□ 1.47
SSBP4-205ENST00000598159 PLA2G4AP47712 749 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 MORC3Q14149 939 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 BTBD8Q5XKL5 378 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 ERMP1Q7Z2K6 904 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.24■■□□□ 1.47
SSBP4-205ENST00000598159 BBS7Q8IWZ6 715 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 ANKRD52Q8NB46 1076 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 RMDN1Q96DB5 314 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 NMUR1Q9HB89 426 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 SPHK2Q9NRA0 654 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.24■■□□□ 1.47
SSBP4-205ENST00000598159 POLR3BQ9NW08 1133 aaPredicted RBP24.24■■□□□ 1.47
SSBP4-205ENST00000598159 EBF1Q9UH73 591 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 DNMT3LQ9UJW3 386 aa24.24■■□□□ 1.47
SSBP4-205ENST00000598159 SPTBN4Q9H254 2564 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 FRYLO94915 3013 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 AXIN1O15169 862 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 RPP40O75818 363 aaKnown RBP24.23■■□□□ 1.47
SSBP4-205ENST00000598159 APBB3O95704 486 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 IRF1P10914 325 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 RALAP11233 206 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 SDHBP21912 280 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 BMP6P22004 513 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms