RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMG9-206ENST00000597598 USP46P62068 366 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 SF3A1Q15459 793 aaKnown RBP11.31□□□□□ -0.6
SMG9-206ENST00000597598 SV2CQ496J9 727 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
SMG9-206ENST00000597598 CACTIN-AS1Q8N1I8 211 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 IGSF8Q969P0 613 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 MED8Q96G25 268 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 OSGEPQ9NPF4 335 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 DDX43Q9NXZ2 648 aaKnown RBP11.31□□□□□ -0.6
SMG9-206ENST00000597598 IL17BQ9UHF5 180 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 EIF2B4Q9UI10 523 aaKnown RBP11.31□□□□□ -0.6
SMG9-206ENST00000597598 DNM3Q9UQ16 869 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 PCDHB6Q9Y5E3 794 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 SNX11Q9Y5W9 270 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 CYP46A1Q9Y6A2 500 aa11.31□□□□□ -0.6
SMG9-206ENST00000597598 FLNCQ14315 2725 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 NOTCH2Q04721 2471 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 GABRDO14764 452 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 BRINP1O60477 761 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 PFKFB2O60825 505 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 DTNBO60941 627 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 OXTRP30559 389 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 ACTN2P35609 894 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 CCT8P50990 548 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 AFF3P51826 1226 aaKnown RBP11.3□□□□□ -0.6
SMG9-206ENST00000597598 UCNP55089 124 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 NCKAP1LP55160 1127 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 POU5F1Q01860 360 aaKnown RBP11.3□□□□□ -0.6
SMG9-206ENST00000597598 CCDC173Q0VFZ6 552 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 LY6DQ14210 128 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 CCDC142Q17RM4 750 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 TBC1D25Q3MII6 688 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 CCDC157Q569K6 752 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 FBXL19Q6PCT2 694 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 VSTM1Q6UX27 236 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 DENND5BQ6ZUT9 1274 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 SPATA2LQ8IUW3 424 aaPredicted RBP11.3□□□□□ -0.6
SMG9-206ENST00000597598 HSCBQ8IWL3 235 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 TMEM86AQ8N2M4 240 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 ZFRQ96KR1 1074 aaKnown RBP11.3□□□□□ -0.6
SMG9-206ENST00000597598 PCED1AQ9H1Q7 454 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 SPHK2Q9NRA0 654 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 SMPD4Q9NXE4 827 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 FTSJ1Q9UET6 329 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 L1RE1Q9UN81 338 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 ANKRD6Q9Y2G4 727 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 RAD54BQ9Y620 910 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 SLCO1B1Q9Y6L6 691 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 TCHHQ07283 1943 aa11.3□□□□□ -0.6
SMG9-206ENST00000597598 TEP1Q99973 2627 aaKnown RBP11.3□□□□□ -0.6
SMG9-206ENST00000597598 PRRT4C9JH25 899 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 H0YCG3 227 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 RFPL3O75679 317 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 SCP2P22307 547 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 ACAT1P24752 427 aaKnown RBP11.29□□□□□ -0.6
SMG9-206ENST00000597598 PNPLA4P41247 253 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 GRIA4P48058 902 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 LIG4P49917 911 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 TPMTP51580 245 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 ZNF132P52740 706 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 CLDN6P56747 220 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 TMPRSS3P57727 454 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 NOP14P78316 857 aaKnown RBP11.29□□□□□ -0.6
SMG9-206ENST00000597598 MYL7Q01449 175 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 INAVAQ3KP66 663 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
SMG9-206ENST00000597598 TMEM25Q86YD3 366 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 C4orf32Q8N8J7 132 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 IGSF22Q8N9C0 903 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 BICD1Q96G01 975 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 ZNF560Q96MR9 790 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 NUP58Q9BVL2 599 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 MKRN2Q9H000 416 aaKnown RBP11.29□□□□□ -0.6
SMG9-206ENST00000597598 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 LRWD1Q9UFC0 647 aa11.29□□□□□ -0.6
SMG9-206ENST00000597598 BOD1L1Q8NFC6 3051 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 LRRK2Q5S007 2527 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 WASH3PC4AMC7 463 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 H0Y8X5 98 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 ENC1O14682 589 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
SMG9-206ENST00000597598 CACNG3O60359 315 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 LHX1P48742 406 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 ENPP2Q13822 863 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 FUT11Q495W5 492 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 HES3Q5TGS1 186 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 GRAMD4Q6IC98 578 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 USP49Q70CQ1 688 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 KCNK18Q7Z418 384 aa11.28□□□□□ -0.6
SMG9-206ENST00000597598 OSTM1Q86WC4 334 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms