RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 GFPT1Q06210 699 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 MTF1Q14872 753 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 SMAD2Q15796 467 aaKnown RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 TRIM72Q6ZMU5 477 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 XYLT1Q86Y38 959 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 FMNL3Q8IVF7 1028 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 NPAS3Q8IXF0 933 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 MAB21L3Q8N8X9 362 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 EDEM1Q92611 657 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 SLITRK1Q96PX8 696 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 PANX2Q96RD6 677 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 NHEJ1Q9H9Q4 299 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 SPTLC3Q9NUV7 552 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 ZNHIT6Q9NWK9 470 aaKnown RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 COMMD8Q9NX08 183 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 IMPACTQ9P2X3 320 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 UXTQ9UBK9 157 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 NAGPAQ9UK23 515 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 C2CD4DB7Z1M9 353 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 GOLGA8SH3BPF8 625 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 ZNF197O14709 1029 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 ATMINO43313 823 aaPredicted RBP16.28■□□□□ 0.2
SMCO4-206ENST00000596676 FYNP06241 537 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 MMP8P22894 467 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 CDC25CP30307 473 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 GABRB2P47870 512 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
SMCO4-206ENST00000596676 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
SMCO4-206ENST00000596676 MON1BQ7L1V2 547 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 TMEM139Q8IV31 216 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
SMCO4-206ENST00000596676 C18orf8Q96DM3 657 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 SYNCQ9H7C4 482 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 ADAM22Q9P0K1 906 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 NENFQ9UMX5 172 aa16.28■□□□□ 0.2
SMCO4-206ENST00000596676 BZW2Q9Y6E2 419 aaKnown RBP16.28■□□□□ 0.2
SMCO4-206ENST00000596676 NCANO14594 1321 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 SOWAHDA6NJG2 315 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 ZNF263O14978 683 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 FTLP02792 175 aaPredicted RBP16.27■□□□□ 0.2
SMCO4-206ENST00000596676 RARGP13631 454 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 NSFP46459 744 aaKnown RBP16.27■□□□□ 0.2
SMCO4-206ENST00000596676 BSPRYQ5W0U4 402 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 OLFML1Q6UWY5 402 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 MON1AQ86VX9 555 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 PHF13Q86YI8 300 aaPredicted RBP16.27■□□□□ 0.2
SMCO4-206ENST00000596676 MCOLN2Q8IZK6 566 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 LEMD2Q8NC56 503 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 MRPS31Q92665 395 aaKnown RBP16.27■□□□□ 0.2
SMCO4-206ENST00000596676 NECTIN4Q96NY8 510 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 NOX5Q96PH1 765 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 GCNAQ96QF7 691 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 PHF7Q9BWX1 381 aaPredicted RBP16.27■□□□□ 0.2
SMCO4-206ENST00000596676 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 CYLDQ9NQC7 956 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 TLR8Q9NR97 1041 aaKnown RBP16.27■□□□□ 0.2
SMCO4-206ENST00000596676 EHD2Q9NZN4 543 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 CDH7Q9ULB5 785 aa16.27■□□□□ 0.2
SMCO4-206ENST00000596676 COCHO43405 550 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 FBXO21O94952 628 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 PRAMEF12O95522 483 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 LTFP02788 710 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 FECHP22830 423 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 VIPR2P41587 438 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 RNASE9P60153 205 aaKnown RBP16.26■□□□□ 0.19
SMCO4-206ENST00000596676 PITX1P78337 314 aaPredicted RBP16.26■□□□□ 0.19
SMCO4-206ENST00000596676 ZXDBP98169 803 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 CDK17Q00537 523 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 SLC6A3Q01959 620 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 FAM78AQ5JUQ0 283 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 CCDC122Q5T0U0 273 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 SNX30Q5VWJ9 437 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 SYPL2Q5VXT5 272 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 TRNP1Q6NT89 227 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 RAD9BQ6WBX8 426 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 SCML4Q8N228 414 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 PDZD8Q8NEN9 1154 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 IPO4Q8TEX9 1081 aaKnown RBP16.26■□□□□ 0.19
SMCO4-206ENST00000596676 RSAD2Q8WXG1 361 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 OVCA2Q8WZ82 227 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 WBP2Q969T9 261 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 RSPRY1Q96DX4 576 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 RPP25Q9BUL9 199 aaKnown RBP16.26■□□□□ 0.19
SMCO4-206ENST00000596676 PACSIN1Q9BY11 444 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 ISCUQ9H1K1 167 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 TASP1Q9H6P5 420 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 GKN1Q9NS71 199 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMCO4-206ENST00000596676 NAALADL1Q9UQQ1 740 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 CCL26Q9Y258 94 aa16.26■□□□□ 0.19
SMCO4-206ENST00000596676 SSU72P8A0A1W2PR75 194 aa16.25■□□□□ 0.19
SMCO4-206ENST00000596676 AKR1B10O60218 316 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms