RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 INTS2Q9H0H0 1204 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 CYLDQ9NQC7 956 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 TSPAN16Q9UKR8 245 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 RIF1Q5UIP0 2472 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 WDR87Q6ZQQ6 2873 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 A0A1W2PQH9 124 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 TULP2O00295 520 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 O00370 1275 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 PAEPP09466 180 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 VDRP11473 427 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 GALK1P51570 392 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 GCNT1Q02742 428 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 CSTF1Q05048 431 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 LRRC32Q14392 662 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 GOLGA7BQ2TAP0 167 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 GAB4Q2WGN9 574 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 DDX42Q86XP3 938 aaKnown RBP eCLIP19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 NELL1Q92832 810 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 ZSWIM1Q9BR11 485 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 KIAA1257Q9ULG3 409 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 PCDHB4Q9Y5E5 795 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 R4GN57 208 aa19.48■□□□□ 0.71
SHKBP1-202ENST00000593764 E2F8A0AVK6 867 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 NFATC1O95644 943 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 TDGF1P13385 188 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 CD19P15391 556 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 ERCC5P28715 1186 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 AMPD2Q01433 879 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 PDE4CQ08493 712 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 NR1H3Q13133 447 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 PKDCCQ504Y2 493 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 TSSK4Q6SA08 328 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 ASCL5Q7RTU5 278 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 CREBRFQ8IUR6 639 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 SYNPOQ8N3V7 929 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 SPEM1Q8N4L4 309 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 KLF16Q9BXK1 252 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 C2orf42Q9NWW7 574 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 FANCMQ8IYD8 2048 aa19.47■□□□□ 0.71
SHKBP1-202ENST00000593764 PTPRZ1P23471 2315 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 SLC9A3R1O14745 358 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 XPO1O14980 1071 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 GREM1O60565 184 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 EGFP01133 1207 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 CALCAP01258 141 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 CYP17A1P05093 508 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 RARGP13631 454 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 ATP5C1P36542 298 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 ZNF132P52740 706 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 BCAT1P54687 386 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 BST2Q10589 180 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 GRSF1Q12849 480 aaKnown RBP eCLIP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 DHCR24Q15392 516 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 KLHDC10Q6PID8 442 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 RHBDF2Q6PJF5 856 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 LCLAT1Q6UWP7 414 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 RBM43Q6ZSC3 357 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 ZNF276Q8N554 614 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 UBA3Q8TBC4 463 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 EZH1Q92800 747 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 P2RY13Q9BPV8 354 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 CRACR2AQ9BSW2 395 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 THAP9Q9H5L6 903 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 NUDT5Q9UKK9 219 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 CNTN6Q9UQ52 1028 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 ATG2BQ96BY7 2078 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 FRYLO94915 3013 aa19.46■□□□□ 0.71
SHKBP1-202ENST00000593764 MYO16Q9Y6X6 1858 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 MYOFQ9NZM1 2061 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 SLC9A1P19634 815 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 OPRD1P41143 372 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 PSEN1P49768 467 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 CCR3P51677 355 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 SLC8A3P57103 927 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 SATB1Q01826 763 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 CNGA2Q16280 664 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 PM20D1Q6GTS8 502 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 PKN3Q6P5Z2 889 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 RBBP8NLQ8NC74 664 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 NACA2Q9H009 215 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 UBE2TQ9NPD8 197 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 CLIC5Q9NZA1 410 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 TBC1D14Q9P2M4 693 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 HESX1Q9UBX0 185 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 NAGPAQ9UK23 515 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 CFAP54Q96N23 3096 aa19.45■□□□□ 0.7
SHKBP1-202ENST00000593764 PRR23AA6NEV1 266 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 MDM4O15151 490 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 GFRA3O60609 400 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 GABBR2O75899 941 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 DRD1P21728 446 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 BRD2P25440 801 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 MTIF2P46199 727 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 PLA2G4AP47712 749 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 CXCL12P48061 93 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 TKTL1P51854 596 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 APBA1Q02410 837 aa19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 TPD52L1Q16890 204 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-202ENST00000593764 TRIM65Q6PJ69 517 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms