RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 XPO1O14980 1071 aaKnown RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 CYP26A1O43174 497 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 COCHO43405 550 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 GALR2O43603 387 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 NFATC1O95644 943 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 ZBED1O96006 694 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 OAS1P00973 400 aaKnown RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 LCP1P13796 627 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 ARSAP15289 507 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 SOX9P48436 509 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 RGS7P49802 495 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 TUBP50607 506 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 USP4Q13107 963 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 RAPGEF1Q13905 1077 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 ZNF77Q15935 545 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 SNX30Q5VWJ9 437 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 TRIM68Q6AZZ1 485 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 LCLAT1Q6UWP7 414 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 UBR7Q8N806 425 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 RNF139Q8WU17 664 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 OSCP1Q8WVF1 389 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 TFAP2BQ92481 460 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 GOLGA1Q92805 767 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 CDK5RAP1Q96SZ6 601 aaKnown RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 FAM83CQ9BQN1 747 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 LSM14BQ9BX40 385 aaKnown RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 OSBPL6Q9BZF3 934 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 PDCL3Q9H2J4 239 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 LMAN1LQ9HAT1 526 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 SPATA6Q9NWH7 488 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 TBC1D14Q9P2M4 693 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 LSM7Q9UK45 103 aaKnown RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 MTF2Q9Y483 593 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 VPS13AQ96RL7 3174 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 SPTBN4Q9H254 2564 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 FAM92AA1XBS5 289 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 BECN2A8MW95 431 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 SCAMP3O14828 347 aaKnown RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 CALCAP01258 141 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 ZDHHC11BP0C7U3 371 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 TARSP26639 723 aaKnown RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 GNA15P30679 374 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 MAGEA9P43362 315 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 PLA2G4AP47712 749 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 MLLT6P55198 1093 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 YWHAGP61981 247 aaKnown RBP eCLIP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 PTK2Q05397 1052 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 GRSF1Q12849 480 aaKnown RBP eCLIP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 LRRC32Q14392 662 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 PON2Q15165 354 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 KRT31Q15323 416 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 SKOR2Q2VWA4 1001 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 ANO6Q4KMQ2 910 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 BTBD8Q5XKL5 378 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 CCDC186Q7Z3E2 898 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 CCDC105Q8IYK2 499 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 AOPEPQ8N6M6 819 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 PRSS33Q8NF86 280 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 ATOH1Q92858 354 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 SECISBP2LQ93073 1101 aaKnown RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 DDX23Q9BUQ8 820 aaKnown RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 ULBP1Q9BZM6 244 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 LINC00597Q9H2U6 94 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 ECT2Q9H8V3 914 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 ST7Q9NRC1 585 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 RASAL2Q9UJF2 1139 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 DNMT3LQ9UJW3 386 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 NUDT5Q9UKK9 219 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 STRIP2Q9ULQ0 834 aa10.59□□□□□ -0.71
BRCA1-227ENST00000591849 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 PTPRZ1P23471 2315 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-227ENST00000591849 E2F8A0AVK6 867 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 H0Y858 1186 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 TULP2O00295 520 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 ARNTLO00327 626 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 LAMTOR5O43504 91 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 OLFM2O95897 454 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 TBX18O95935 607 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 HMBSP08397 361 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 TCF3P15923 654 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 CTHP32929 405 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 KRT9P35527 623 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 COPB1P53618 953 aaKnown RBP10.58□□□□□ -0.72
BRCA1-227ENST00000591849 BPIFB4P59827 614 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 TPM4P67936 248 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 COG7P83436 770 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 APBA1Q02410 837 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 ADIGQ0VDE8 80 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 EFEMP1Q12805 493 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 KLHL40Q2TBA0 621 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 MIIPQ5JXC2 388 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 DGKKQ5KSL6 1271 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 SCD5Q86SK9 330 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 MIB1Q86YT6 1006 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 MIS12Q9H081 205 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 NMUR1Q9HB89 426 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 HPS4Q9NQG7 708 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.58□□□□□ -0.72
BRCA1-227ENST00000591849 CLIC5Q9NZA1 410 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms