RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 SAR1BQ9Y6B6 198 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 COL16A1Q07092 1604 aaPredicted RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 ERN1O75460 977 aaKnown RBP11.84□□□□□ -0.51
SEH1L-208ENST00000590843 APOA4P06727 396 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 RARGP13631 454 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CES1P23141 567 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 BMPR1AP36894 532 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 NCKAP1LP55160 1127 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CASP6P55212 293 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 ZNF792Q3KQV3 632 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 FBXO43Q4G163 708 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 ARHGAP24Q8N264 748 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 RUBCNLQ9H714 662 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 KRT37O76014 449 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 KRT38O76015 456 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 FAXCQ5TGI0 409 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 WNT8AQ9H1J5 351 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 ELAC1Q9H777 363 aaKnown RBP11.84□□□□□ -0.51
SEH1L-208ENST00000590843 COMMD8Q9NX08 183 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 STOML1Q9UBI4 398 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 GULP1Q9UBP9 304 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 UBA2Q9UBT2 640 aaPredicted RBP11.84□□□□□ -0.51
SEH1L-208ENST00000590843 RHPN2P1A8MT19 583 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 PURAQ00577 322 aaKnown RBP11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CAV1Q03135 178 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CYP24A1Q07973 514 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 ITPRIPL2Q3MIP1 535 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 MRNIPQ6NTE8 343 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 GPIHBP1Q8IV16 184 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 NPLOC4Q8TAT6 608 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.51
SEH1L-208ENST00000590843 SLC13A1Q9BZW2 595 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CCDC66A2RUB6 948 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CCINQ13939 588 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CCDC62Q6P9F0 684 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 CYP2U1Q7Z449 544 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 SYTL1Q8IYJ3 562 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 IGSF9Q9P2J2 1179 aa11.84□□□□□ -0.51
SEH1L-208ENST00000590843 IQANK1A0A1B0GTG1 560 aa11.83□□□□□ -0.51
SEH1L-208ENST00000590843 CYP26A1O43174 497 aa11.83□□□□□ -0.51
SEH1L-208ENST00000590843 EN2P19622 333 aaPredicted RBP11.83□□□□□ -0.51
SEH1L-208ENST00000590843 BBS9Q3SYG4 887 aa11.83□□□□□ -0.51
SEH1L-208ENST00000590843 ARMC12Q5T9G4 340 aa11.83□□□□□ -0.51
SEH1L-208ENST00000590843 MON1AQ86VX9 555 aa11.83□□□□□ -0.51
SEH1L-208ENST00000590843 FOXJ1Q92949 421 aa11.83□□□□□ -0.51
SEH1L-208ENST00000590843 SOWAHBA6NEL2 793 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 TEX33O43247 280 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 CSDE1O75534 798 aaKnown RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 RBMS1P29558 406 aaKnown RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 CUL4AQ13619 759 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 TARBP2Q15633 366 aaKnown RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 PKN3Q6P5Z2 889 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 NRSN1Q8IZ57 195 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 MMGT1Q8N4V1 131 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 MAGEB10Q96LZ2 347 aaPredicted RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 PRDM12Q9H4Q4 367 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 FRMPD4Q14CM0 1322 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 NFICP08651 508 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 PDK2Q15119 407 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 BPIFB1Q8TDL5 484 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 NXPE3Q969Y0 559 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 ATP13A3Q9H7F0 1226 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 IL17RBQ9NRM6 502 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 NPHP3-ACAD11A0A0J9YXS1 232 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 PP2D1A8MPX8 630 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 SMAPO00193 183 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 EPHX1P07099 455 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 GUCY1A2P33402 732 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 YWHAZP63104 245 aaKnown RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 CAP1Q01518 475 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 CDR2Q01850 454 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 ILF3Q12906 894 aaKnown RBP eCLIP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 XKR4Q5GH76 650 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 SMYD4Q8IYR2 804 aaPredicted RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 DCLK2Q8N568 766 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 FGF10O15520 208 aaPredicted RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 RASSF9O75901 435 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 FSBPO95073 299 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 LTFP02788 710 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 FTLP02792 175 aaPredicted RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 SH2D4BQ5SQS7 431 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 WSCD1Q658N2 575 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 LPCAT2Q7L5N7 544 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 PYROXD1Q8WU10 500 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 SLC22A17Q8WUG5 538 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 HEXDCQ8WVB3 486 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 EEF2KMTQ96G04 330 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 KAZALD1Q96I82 304 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 RUSC1Q9BVN2 902 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 CLPBQ9H078 707 aa11.83□□□□□ -0.52
SEH1L-208ENST00000590843 FAM124BQ9H5Z6 455 aaPredicted RBP11.83□□□□□ -0.52
SEH1L-208ENST00000590843 A6NNZ2 444 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 LGALS16A8MUM7 142 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 EFCAB8A8MWE9 144 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 RGPD1P0DJD0 1748 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
SEH1L-208ENST00000590843 HPCAP84074 193 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 EHHADHQ08426 723 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms