RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 YWHAGP61981 247 aaKnown RBP eCLIP15.33■□□□□ 0.04
CNN1-208ENST00000588935 MEA1Q16626 185 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 BTBD8Q5XKL5 378 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 TRIM72Q6ZMU5 477 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 MMS22LQ6ZRQ5 1243 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 TMEM110Q86TL2 294 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 MON1AQ86VX9 555 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.33■□□□□ 0.04
CNN1-208ENST00000588935 PDZD8Q8NEN9 1154 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 EDEM1Q92611 657 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 FAM149B1Q96BN6 582 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 ACSF2Q96CM8 615 aaPredicted RBP15.33■□□□□ 0.04
CNN1-208ENST00000588935 C18orf8Q96DM3 657 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 SLC22A12Q96S37 553 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 DNAJC7Q99615 494 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 SYT11Q9BT88 431 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 TASP1Q9H6P5 420 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 CCSER2Q9H7U1 834 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 CNGB3Q9NQW8 809 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 OSER1Q9NX31 292 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.04
CNN1-208ENST00000588935 LIMD1Q9UGP4 676 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 ADAMTS1Q9UHI8 967 aa15.33■□□□□ 0.04
CNN1-208ENST00000588935 BZW2Q9Y6E2 419 aaKnown RBP15.33■□□□□ 0.04
CNN1-208ENST00000588935 DENND4AQ7Z401 1863 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 FAM92AA1XBS5 289 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 MDM4O15151 490 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 LSM8O95777 96 aaKnown RBP15.32■□□□□ 0.04
CNN1-208ENST00000588935 TBX18O95935 607 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 UNGP13051 313 aaPredicted RBP15.32■□□□□ 0.04
CNN1-208ENST00000588935 LAMP2P13473 410 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 RARGP13631 454 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 HDCP19113 662 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 CDH5P33151 784 aaPredicted RBP15.32■□□□□ 0.04
CNN1-208ENST00000588935 NSFP46459 744 aaKnown RBP15.32■□□□□ 0.04
CNN1-208ENST00000588935 RNASE9P60153 205 aaKnown RBP15.32■□□□□ 0.04
CNN1-208ENST00000588935 TAF5Q15542 800 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 FAM78AQ5JUQ0 283 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 HECTD3Q5T447 861 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 PM20D1Q6GTS8 502 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 ACAD10Q6JQN1 1059 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 FAM183BPQ6ZVS7 135 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 VPS36Q86VN1 386 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 TDRD5Q8NAT2 981 aaKnown RBP15.32■□□□□ 0.04
CNN1-208ENST00000588935 OLIG1Q8TAK6 271 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 ZSCAN18Q8TBC5 510 aaPredicted RBP15.32■□□□□ 0.04
CNN1-208ENST00000588935 NACA2Q9H009 215 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 RNF38Q9H0F5 515 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 ADAM22Q9P0K1 906 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 NR2E1Q9Y466 385 aa15.32■□□□□ 0.04
CNN1-208ENST00000588935 A0A087X0T9 212 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 TRAV19A0A0A6YYK7 116 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 FBXO21O94952 628 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 CKMP06732 381 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 FAM228BP0C875 321 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 MBL2P11226 248 aaPredicted RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 RALAP11233 206 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 HNRNPH3P31942 346 aaKnown RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 VIPR2P41587 438 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 PPP3CCP48454 512 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 RPL34P49207 117 aaKnown RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 SNX16P57768 344 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 C10orf120Q5SQS8 335 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 BSPRYQ5W0U4 402 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 BHLHA9Q7RTU4 235 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 ARID3BQ8IVW6 561 aaPredicted RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 MSANTD4Q8NCY6 345 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 RSAD2Q8WXG1 361 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 OVCA2Q8WZ82 227 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 GOLGA1Q92805 767 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 PIWIL1Q96J94 861 aaKnown RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 NECAB3Q96P71 396 aaPredicted RBP15.31■□□□□ 0.04
CNN1-208ENST00000588935 SMPD4Q9NXE4 827 aa15.31■□□□□ 0.04
CNN1-208ENST00000588935 GOLGA6L6A8MZA4 724 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 COCHO43405 550 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 AKR1B10O60218 316 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 TLR5O60602 858 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 GJB6O95452 261 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 LTFP02788 710 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 FTLP02792 175 aaPredicted RBP15.3■□□□□ 0.04
CNN1-208ENST00000588935 ZDHHC11BP0C7U3 371 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 AVPR1AP37288 418 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 SLC6A3Q01959 620 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 GFPT1Q06210 699 aaPredicted RBP15.3■□□□□ 0.04
CNN1-208ENST00000588935 EFEMP1Q12805 493 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 CCDC122Q5T0U0 273 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 TANGO2Q6ICL3 276 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 PARM1Q6UWI2 310 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 CMTM8Q8IZV2 173 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 ARHGAP18Q8N392 663 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 RNF139Q8WU17 664 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 CCDC42Q96M95 316 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 KXD1Q9BQD3 176 aa15.3■□□□□ 0.04
CNN1-208ENST00000588935 RPP25Q9BUL9 199 aaKnown RBP15.3■□□□□ 0.04
CNN1-208ENST00000588935 NHEJ1Q9H9Q4 299 aaPredicted RBP15.3■□□□□ 0.04
CNN1-208ENST00000588935 CYLDQ9NQC7 956 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms