RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CLEC16AQ2KHT3 1053 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 TDRD12Q587J7 1177 aaKnown RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 BTBD8Q5XKL5 378 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ACAD10Q6JQN1 1059 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ARCQ7LC44 396 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 GPRIN1Q7Z2K8 1008 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ZNF571Q7Z3V5 609 aaPredicted RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 TMEM150AQ86TG1 271 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.892e-6■■■□□ 17.9
CIRBP-218ENST00000588344 PHF13Q86YI8 300 aaPredicted RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 PASD1Q8IV76 773 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 CMTM8Q8IZV2 173 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 RNF139Q8WU17 664 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ELSPBP1Q96BH3 223 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 TCEAL4Q96EI5 215 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 MCRS1Q96EZ8 462 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 TRIM11Q96F44 468 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 RPGRIP1Q96KN7 1286 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 CCDC42Q96M95 316 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 PANX2Q96RD6 677 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 SYT11Q9BT88 431 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 SLC46A2Q9BY10 475 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ULBP1Q9BZM6 244 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 NACA2Q9H009 215 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 DEF6Q9H4E7 631 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 KIF9Q9HAQ2 790 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ZFP14Q9HCL3 533 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 TDP1Q9NUW8 608 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 SEPT11Q9NVA2 429 aaKnown RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 RRN3Q9NYV6 651 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 GMIPQ9P107 970 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 NAGPAQ9UK23 515 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 MYO7AQ13402 2215 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 PRUNE2Q8WUY3 3088 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 E5RJQ4 531 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ANHXE9PGG2 379 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 DPYSL4O14531 572 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 TLR5O60602 858 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 RTN2O75298 545 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ECI2O75521 394 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 OAS1P00973 400 aaKnown RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CALB1P05937 261 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CFHP08603 1231 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 MYBL1P10243 752 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 RARGP13631 454 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 TCF3P15923 654 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CEBPBP17676 345 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ADKP55263 362 aaKnown RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 GSDMDP57764 484 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 YWHAZP63104 245 aaKnown RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 SLC7A9P82251 487 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 COG7P83436 770 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 SLC6A3Q01959 620 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CENPCQ03188 943 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ZP2Q05996 745 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 IFRD2Q12894 506 aaPredicted RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 MTA1Q13330 715 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 NAA35Q5VZE5 725 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 BSPRYQ5W0U4 402 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 HGSNATQ68CP4 663 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 TXNDC8Q6A555 127 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 RSRC2Q7L4I2 434 aaKnown RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ARID3BQ8IVW6 561 aaPredicted RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CCDC170Q8IYT3 715 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CELF5Q8N6W0 485 aaKnown RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 MAB21L3Q8N8X9 362 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 SLC30A5Q8TAD4 765 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ZSCAN18Q8TBC5 510 aaPredicted RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 SLC20A1Q8WUM9 679 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CPA5Q8WXQ8 436 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ASB16Q96NS5 453 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 MYADMQ96S97 322 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 CPXM1Q96SM3 734 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 POPDC2Q9HBU9 364 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 THG1LQ9NWX6 298 aaKnown RBP9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ADAM22Q9P0K1 906 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ADAMTS1Q9UHI8 967 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 ARHGAP26Q9UNA1 814 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 TSC2P49815 1807 aa9.51□□□□□ -0.89
CIRBP-218ENST00000588344 A0A1W2PQH9 124 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 YJEFN3A6XGL0 299 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 C2CD4DB7Z1M9 353 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 E7ENQ6 273 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 CAPN9O14815 690 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 PAPSS1O43252 624 aaPredicted RBP9.5□□□□□ -0.89
CIRBP-218ENST00000588344 HSF2BPO75031 334 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 TADA3O75528 432 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 GABBR2O75899 941 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 OLFM2O95897 454 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 LTFP02788 710 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 FTLP02792 175 aaPredicted RBP9.5□□□□□ -0.89
CIRBP-218ENST00000588344 CKMP06732 381 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 SKILP12757 684 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 GJA1P17302 382 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms