RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SPDYE16A6NNV3 312 aaPredicted RBP19.33■□□□□ 0.69
DDX39A-206ENST00000587730 H7C0C1 242 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 FCHO1O14526 889 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 PPP1R12AO14974 1030 aaPredicted RBP19.33■□□□□ 0.69
DDX39A-206ENST00000587730 NPTXRO95502 500 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 OSBPP22059 807 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 ATP5OP48047 213 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 PSEN1P49768 467 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 SLC26A2P50443 739 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 CDH6P55285 790 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 TNFAIP2Q03169 654 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 STXBP5Q5T5C0 1151 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 ANO7Q6IWH7 933 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 PLPPR4Q7Z2D5 763 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 KIRREL3Q8IZU9 778 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 ZNF784Q8NCA9 323 aaPredicted RBP19.33■□□□□ 0.69
DDX39A-206ENST00000587730 TTC8Q8TAM2 541 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 RNF157Q96PX1 679 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 GCOM2Q9BZD3 368 aaPredicted RBP19.33■□□□□ 0.69
DDX39A-206ENST00000587730 FZD8Q9H461 694 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 DNAJB4Q9UDY4 337 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 PCSK1NQ9UHG2 260 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 CYTH4Q9UIA0 394 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 ANGPTL2Q9UKU9 493 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 TNFSF13BQ9Y275 285 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 PLLPQ9Y342 182 aa19.33■□□□□ 0.69
DDX39A-206ENST00000587730 CILPO75339 1184 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 MICAL2O94851 1124 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 PSMG1O95456 288 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 CD48P09326 243 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 MYL2P10916 166 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 BGNP21810 368 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 KHDC1Q4VXA5 237 aaKnown RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 FAM102AQ5T9C2 384 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 CYS1Q717R9 158 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 ARCQ7LC44 396 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 APOBEC3FQ8IUX4 373 aaKnown RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 NFKBIZQ9BYH8 718 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 SDCBP2Q9H190 292 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 ZC3H7BQ9UGR2 993 aaKnown RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 HACL1Q9UJ83 578 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 COL11A1P12107 1806 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 TRIM49D1C9J1S8 452 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 DPYSL4O14531 572 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 SRGAP2CP0DJJ0 459 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 TCF7P36402 384 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 YWHAZP63104 245 aaKnown RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 KRT81Q14533 505 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 RCN1Q15293 331 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 NOL9Q5SY16 702 aaKnown RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 NBPF12Q5TAG4 269 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 CDKL3Q8IVW4 592 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 E2F7Q96AV8 911 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 KLF6Q99612 283 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 FAM96AQ9H5X1 160 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 STN1Q9H668 368 aaKnown RBP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 RAB6BQ9NRW1 208 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.32■□□□□ 0.68
DDX39A-206ENST00000587730 TAS2R1Q9NYW7 299 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 SIRPGQ9P1W8 387 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 TTLL3Q9Y4R7 772 aa19.32■□□□□ 0.68
DDX39A-206ENST00000587730 C2CD4BA6NLJ0 364 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 H0Y3Z8 333 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 M0QYV0 167 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 APOL1O14791 398 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 LGR5O75473 907 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 CIB2O75838 187 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 ZBED1O96006 694 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 YBX3P16989 372 aaKnown RBP eCLIP19.31■□□□□ 0.682e-7■□□□□ 10
DDX39A-206ENST00000587730 ZFXP17010 805 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-206ENST00000587730 AP1B1Q10567 949 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 TRMT5Q32P41 509 aaKnown RBP19.31■□□□□ 0.68
DDX39A-206ENST00000587730 SNX30Q5VWJ9 437 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 NET1Q7Z628 596 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-206ENST00000587730 CRLF3Q8IUI8 442 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 IGDCC3Q8IVU1 814 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 EMC1Q8N766 993 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 FAM167BQ9BTA0 163 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 ADAM33Q9BZ11 813 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 ASB7Q9H672 318 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 USP29Q9HBJ7 922 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 NMRK1Q9NWW6 199 aa19.31■□□□□ 0.68
DDX39A-206ENST00000587730 TTLL13PA6NNM8 815 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 STAU1O95793 577 aaKnown RBP19.3■□□□□ 0.68
DDX39A-206ENST00000587730 KRT19P08727 400 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 PGM1P36871 562 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 GPD2P43304 727 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 POU5F1BQ06416 359 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 GSTA3Q16772 222 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 SH3D19Q5HYK7 790 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 LRRC74BQ6ZQY2 392 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 CTAGE3PQ8IX95 158 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 PDCD7Q8N8D1 485 aaKnown RBP19.3■□□□□ 0.68
DDX39A-206ENST00000587730 C10orf88Q9H8K7 445 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 POPDC2Q9HBU9 364 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 XAB2Q9HCS7 855 aaKnown RBP19.3■□□□□ 0.68
DDX39A-206ENST00000587730 PRMT7Q9NVM4 692 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-206ENST00000587730 DOCK5Q9H7D0 1870 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 MAP3K7O43318 606 aa19.3■□□□□ 0.68
DDX39A-206ENST00000587730 APOEP02649 317 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms