RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 SCUBE3Q8IX30 993 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 EFHBQ8N7U6 833 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 NIPA2Q8N8Q9 360 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 SLC35G2Q8TBE7 412 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 FEZF2Q8TBJ5 459 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 FBXO32Q969P5 355 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 GCNAQ96QF7 691 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 ULBP1Q9BZM6 244 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 SFXN1Q9H9B4 322 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 CERS4Q9HA82 394 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 MAN1C1Q9NR34 630 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 TRPM5Q9NZQ8 1165 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 PYCARDQ9ULZ3 195 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 SLC27A5Q9Y2P5 690 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 HCFC2Q9Y5Z7 792 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 MYO16Q9Y6X6 1858 aa10.85□□□□□ -0.67
CLPTM1-207ENST00000587537 ATG2AQ2TAZ0 1938 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 TMEM191CA6NGB0 347 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 SPDYE4A6NLX3 237 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 TULP2O00295 520 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 DPYSL4O14531 572 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 ZNF197O14709 1029 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 CAPN9O14815 690 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 RNF8O76064 485 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 F9P00740 461 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 ZDHHC11BP0C7U3 371 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 PTPN2P17706 415 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 SDC4P31431 198 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 GBP1P32455 592 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 SSTR3P32745 418 aaPredicted RBP10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 MATKP42679 507 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 NRIP1P48552 1158 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 ZNF143P52747 638 aaPredicted RBP10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 CACNA2D1P54289 1103 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 EPHA5P54756 1037 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 AIF1P55008 147 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 NAP1L1P55209 391 aaKnown RBP10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 CYP4A22Q5TCH4 519 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 REXO1L1PQ8IX06 675 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 FAM149B1Q96BN6 582 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 PGAP3Q96FM1 320 aaPredicted RBP10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 SLC2A13Q96QE2 648 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 CNPY3Q9BT09 278 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 PACSIN1Q9BY11 444 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 PRKD2Q9BZL6 878 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 LACRTQ9GZZ8 138 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 CRISPLD1Q9H336 500 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 ASAH2Q9NR71 780 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 ANAPC7Q9UJX3 599 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 TMEM59LQ9UK28 342 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 PCDHGC5Q9Y5F6 944 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 MYO9BQ13459 2157 aa10.84□□□□□ -0.67
CLPTM1-207ENST00000587537 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 MIF4GDA9UHW6 222 aaKnown RBP10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 GOLGA8SH3BPF8 625 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 USP17L7P0C7H9 530 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 SLC2A3P11169 496 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 PDGFRAP16234 1089 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 GPD1P21695 349 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 PCK1P35558 622 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 YWHAGP61981 247 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 ITIH3Q06033 890 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 KCNC3Q14003 757 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 SLC25A52Q3SY17 297 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 BTBD8Q5XKL5 378 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 POTEHQ6S545 545 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 SND1Q7KZF4 910 aaKnown RBP eCLIP10.83□□□□□ -0.684e-18■■■□□ 15.7
CLPTM1-207ENST00000587537 STRADAQ7RTN6 431 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 GPRIN1Q7Z2K8 1008 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 SPRED2Q7Z698 418 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 DNAJB7Q7Z6W7 309 aaPredicted RBP10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 TTC9BQ8N6N2 239 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 RNF139Q8WU17 664 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 ARHGEF26Q96DR7 871 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 MCEEQ96PE7 176 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 DDX23Q9BUQ8 820 aaKnown RBP10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 LZTFL1Q9NQ48 299 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 METTL5Q9NRN9 209 aaKnown RBP10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 GUCA1BQ9UMX6 200 aa10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLPTM1-207ENST00000587537 MACROD2A1Z1Q3 448 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 RCCD1A6NED2 376 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 C2CD4BA6NLJ0 364 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 PROSCO94903 275 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 HMGA1P17096 107 aaKnown RBP10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 TAF10Q12962 218 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 COL19A1Q14993 1142 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 HADHQ16836 314 aaKnown RBP10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 ARHGAP15Q53QZ3 475 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 LRRC38Q5VT99 294 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 BSPRYQ5W0U4 402 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 MSANTD2Q6P1R3 559 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 POLNQ7Z5Q5 900 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 SLFN11Q7Z7L1 901 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 DAAM2Q86T65 1068 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 PSTKQ8IV42 348 aaKnown RBP10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 KIAA1958Q8N8K9 716 aa10.82□□□□□ -0.68
CLPTM1-207ENST00000587537 TPCN2Q8NHX9 752 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms