RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ATL2Q8NHH9 583 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 CAVIN3Q969G5 261 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 TBCBQ99426 244 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 FAM118BQ9BPY3 351 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 FAN1Q9Y2M0 1017 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 HHLA1C9JL84 531 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 DAB1O75553 588 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 ECHS1P30084 290 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 SLC11A1P49279 550 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 DRG2P55039 364 aaKnown RBP20.74■□□□□ 0.91
TRIM47-204ENST00000587339 CDH6P55285 790 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 TAZQ16635 292 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 SLC25A52Q3SY17 297 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 DCAF6Q58WW2 860 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 CNKSR3Q6P9H4 555 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 TEKT4Q8WW24 435 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 CCDC114Q96M63 670 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 POPDC2Q9HBU9 364 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 HCSTQ9UBK5 93 aa20.74■□□□□ 0.91
TRIM47-204ENST00000587339 GAS8O95995 478 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 FAM153BP0C7A2 387 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 NOS2P35228 1153 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 LBX1P52954 281 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 DAOAP59103 153 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 FAM153CQ494X1 144 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 VARS2Q5ST30 1063 aaKnown RBP20.73■□□□□ 0.91
TRIM47-204ENST00000587339 FAM171A1Q5VUB5 890 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRIM47-204ENST00000587339 STRADAQ7RTN6 431 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 CEP57Q86XR8 500 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 MAP7D3Q8IWC1 876 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 LRRC43Q8N309 656 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 PNPLA8Q9NP80 782 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 FAM153AQ9UHL3 310 aa20.73■□□□□ 0.91
TRIM47-204ENST00000587339 SF3B1O75533 1304 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRIM47-204ENST00000587339 UPP2O95045 317 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 ZBED1O96006 694 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 OR4Q2P0C623 313 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 USP17L7P0C7H9 530 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 DYNLT1P63172 113 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 KRT17Q04695 432 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 NNTQ13423 1086 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 LRRC26Q2I0M4 334 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 DCP1BQ8IZD4 617 aaKnown RBP20.72■□□□□ 0.91
TRIM47-204ENST00000587339 TMEM175Q9BSA9 504 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 ADAM33Q9BZ11 813 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 GPR62Q9BZJ7 368 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 ZCWPW1Q9H0M4 648 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 MARCH5Q9NX47 278 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 OGFRQ9NZT2 677 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 STAP1Q9ULZ2 295 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 MDM4O15151 490 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 LIASO43766 372 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 CST8O60676 142 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 ENDOD1O94919 500 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 RFC2P35250 354 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 SULT1E1P49888 294 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 KRT81Q14533 505 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 PDK2Q15119 407 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 SLC39A12Q504Y0 691 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 SYDE1Q6ZW31 735 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-204ENST00000587339 SNRNP25Q9BV90 132 aaKnown RBP20.72■□□□□ 0.91
TRIM47-204ENST00000587339 VIPAS39Q9H9C1 493 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 SNX24Q9Y343 169 aa20.72■□□□□ 0.91
TRIM47-204ENST00000587339 SPDYE4A6NLX3 237 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 YJEFN3A6XGL0 299 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 E7ENQ6 273 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 CAPN9O14815 690 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 GALTP07902 379 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 ATXN1P54253 815 aaKnown RBP20.71■□□□□ 0.91
TRIM47-204ENST00000587339 BYSLQ13895 437 aaKnown RBP20.71■□□□□ 0.91
TRIM47-204ENST00000587339 ERMARDQ5T6L9 678 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 DRICH1Q6PGQ1 229 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-204ENST00000587339 HFE2Q6ZVN8 426 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 BBS12Q6ZW61 710 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 RFX6Q8HWS3 928 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 HAUS1Q96CS2 278 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 SLC2A13Q96QE2 648 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 MAK16Q9BXY0 300 aaKnown RBP20.71■□□□□ 0.91
TRIM47-204ENST00000587339 NEUROG2Q9H2A3 272 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 FAM53CQ9NYF3 392 aa20.71■□□□□ 0.91
TRIM47-204ENST00000587339 MKI67P46013 3256 aaKnown RBP20.71■□□□□ 0.91
TRIM47-204ENST00000587339 NT5C1B-RDH14C9J2C7 533 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 GBP1P32455 592 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 PBX3P40426 434 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 ARSEP51690 589 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 LMNB2Q03252 620 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 DPYSL3Q14195 570 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 CTXN3Q4LDR2 81 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 ZC3H12AQ5D1E8 599 aaKnown RBP20.7■□□□□ 0.91
TRIM47-204ENST00000587339 SYPL2Q5VXT5 272 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 FUT10Q6P4F1 479 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 TTC13Q8NBP0 860 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 NT5C3BQ969T7 300 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 NPY6RQ99463 290 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 GPATCH2LQ9NWQ4 482 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 DNPEPQ9ULA0 475 aa20.7■□□□□ 0.91
TRIM47-204ENST00000587339 CYP2F1P24903 491 aa20.7■□□□□ 0.9
TRIM47-204ENST00000587339 GRIK1P39086 918 aa20.7■□□□□ 0.9
TRIM47-204ENST00000587339 RPL21P46778 160 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms