RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 MAP3K7CLP57077 242 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 HECTD3Q5T447 861 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 N4BP2L1Q5TBK1 243 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 PMS2CLQ68D20 193 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 RNF43Q68DV7 783 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 ARMCX6Q7L4S7 300 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 RASSF3Q86WH2 238 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 PHTF2Q8N3S3 785 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 GOLGA5Q8TBA6 731 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 TWNKQ96RR1 684 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 EDEM2Q9BV94 578 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 MAPK8IP1Q9UQF2 711 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 ATP8B3O60423 1300 aa16.1■□□□□ 0.17
PRKCSH-204ENST00000587290 LNP1A1A4G5 178 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 SLC9A3R1O14745 358 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 FOXD2O60548 495 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 ADAM23O75077 832 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 RHOBTB1O94844 696 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 APODP05090 189 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 ADORA2BP29275 332 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 PIK3CAP42336 1068 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 KIR2DL1P43626 348 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 ASPAP45381 313 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 ZACNQ401N2 412 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 USP39Q53GS9 565 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 SV2AQ7L0J3 742 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 PDZD8Q8NEN9 1154 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 TNIP3Q96KP6 325 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 MMRN2Q9H8L6 949 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 IL37Q9NZH6 218 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 SH3BP1Q9Y3L3 701 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 FRYQ5TBA9 3013 aa16.09■□□□□ 0.17
PRKCSH-204ENST00000587290 E2F8A0AVK6 867 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 C4orf47A7E2U8 309 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 GIPC1O14908 333 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 MDM4O15151 490 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 CYP26A1O43174 497 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 HLA-DRAP01903 254 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 WASP42768 502 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 DHPSP49366 369 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 MRPS21P82921 87 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 ANO4Q32M45 955 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 DDX42Q86XP3 938 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 SLC9A9Q8IVB4 645 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 HMGB4Q8WW32 186 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 OVCA2Q8WZ82 227 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 NACA2Q9H009 215 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 APOBEC3GQ9HC16 384 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 OSER1Q9NX31 292 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 NUDT5Q9UKK9 219 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 CFAP45Q9UL16 551 aa16.08■□□□□ 0.16
PRKCSH-204ENST00000587290 ZFHX4Q86UP3 3567 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 TCRBV21S2A2A0A5A6 115 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 FAM92AA1XBS5 289 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 TLR5O60602 858 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 TULP3O75386 442 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 ASS1P00966 412 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 RPN1P04843 607 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 ZDHHC11BP0C7U3 371 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 PDIA4P13667 645 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 GCLMP48507 274 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 AP3M2P53677 418 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 PSAPL1Q6NUJ1 521 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 MIB1Q86YT6 1006 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 ETFBKMTQ8IXQ9 262 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 BCCIPQ9P287 314 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 TBC1D14Q9P2M4 693 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 MBD1Q9UIS9 605 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 HCN2Q9UL51 889 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 ZDHHC9Q9Y397 364 aa16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 ATXN2Q99700 1313 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-204ENST00000587290 CEP295Q9C0D2 2601 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 PDXKO00764 312 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 KCNK5O95279 499 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 CD58P19256 250 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 EIF2DP41214 584 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 GRIA2P42262 883 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 NDUFA8P51970 172 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 GAD2Q05329 585 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 PPP3CAQ08209 521 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 SGSM1Q2NKQ1 1148 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 C10orf76Q5T2E6 689 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 ATL3Q6DD88 541 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 CYP2U1Q7Z449 544 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 TMEFF1Q8IYR6 380 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 OLIG1Q8TAK6 271 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 TMC2Q8TDI7 906 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 TAS1R2Q8TE23 839 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 DDX1Q92499 740 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 PIGKQ92643 395 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 BHMTQ93088 406 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
PRKCSH-204ENST00000587290 LSM14BQ9BX40 385 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms