RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GPR17Q13304 367 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 ZBTB6Q15916 424 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 MGAT5BQ3V5L5 792 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 C10orf76Q5T2E6 689 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 IL31Q6EBC2 164 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 SLC39A4Q6P5W5 647 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 ZPBP2Q6X784 338 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 KIAA1328Q86T90 577 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 TMEM150AQ86TG1 271 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 LRRTM3Q86VH5 581 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 WDR5BQ86VZ2 330 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 RALGPS2Q86X27 583 aaPredicted RBP8.32□□□□□ -1.08
VMP1-204ENST00000587259 C17orf53Q8N3J3 647 aaPredicted RBP8.32□□□□□ -1.08
VMP1-204ENST00000587259 BPIFB1Q8TDL5 484 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 POMGNT1Q8WZA1 660 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 PSMG2Q969U7 264 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 SENP8Q96LD8 212 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 SPAG5Q96R06 1193 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 EIF3CQ99613 913 aaKnown RBP8.32□□□□□ -1.08
VMP1-204ENST00000587259 HAUS4Q9H6D7 363 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 C8orf33Q9H7E9 229 aaPredicted RBP8.32□□□□□ -1.08
VMP1-204ENST00000587259 HPS4Q9NQG7 708 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 TRMT1Q9NXH9 659 aaKnown RBP8.32□□□□□ -1.08
VMP1-204ENST00000587259 LAMA1P25391 3075 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 LRRC53A6NM62 1247 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 C1QTNF9BB2RNN3 333 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 ANKRD63C9JTQ0 380 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 TM4SF5O14894 197 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 HCRTO43612 131 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 AKR1B10O60218 316 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 LRP3O75074 770 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 RNF40O75150 1001 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 RPP40O75818 363 aaKnown RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 PAPSS2O95340 614 aaPredicted RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 LCA5LO95447 670 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 CLTAP09496 248 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 C1QTNF9P0C862 333 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 UCHL3P15374 230 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 FERP16591 822 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 ACOT2P49753 483 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 LILRA4P59901 499 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 KCNA1Q09470 495 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 SURF1Q15526 300 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 ASIC2Q16515 512 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 SNRNP35Q16560 246 aaKnown RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 DGKKQ5KSL6 1271 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 STPG1Q5TH74 334 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 TXNDC8Q6A555 127 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 PSAPL1Q6NUJ1 521 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 TOGARAM2Q6ZUX3 1019 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 RRAGAQ7L523 313 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 GPD1LQ8N335 351 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 MAB21L3Q8N8X9 362 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 C12orf50Q8NA57 414 aaPredicted RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 LEMD2Q8NC56 503 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 ANKK1Q8NFD2 765 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 MYRIPQ8NFW9 859 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 GAB3Q8WWW8 586 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 BAP1Q92560 729 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 EZH1Q92800 747 aaPredicted RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 IER2Q9BTL4 223 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 TASP1Q9H6P5 420 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 NHEJ1Q9H9Q4 299 aaPredicted RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 TMLHEQ9NVH6 421 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 ABI2Q9NYB9 513 aaPredicted RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 AIPL1Q9NZN9 384 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 APEX2Q9UBZ4 518 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 ANGPTL2Q9UKU9 493 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 UBQLN1Q9UMX0 589 aaKnown RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 MAGED2Q9UNF1 606 aaPredicted RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 R3HCC1Q9Y3T6 440 aaKnown RBP8.31□□□□□ -1.08
VMP1-204ENST00000587259 TSC2P49815 1807 aa8.31□□□□□ -1.08
VMP1-204ENST00000587259 ZNF233A6NK53 670 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 OR6C75A6NL08 312 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 USP27XA6NNY8 438 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 EPN2O95208 641 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 ZNF806P0C7X5 589 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 PON1P27169 355 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 MPLP40238 635 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 PRKCIP41743 596 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 STAT1P42224 750 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 RAP1GAPP47736 663 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 CASP4P49662 377 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 MXI1P50539 228 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 GALK1P51570 392 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 AP3M2P53677 418 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 WNT7BP56706 349 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 POLR2FP61218 127 aaKnown RBP8.3□□□□□ -1.08
VMP1-204ENST00000587259 TUBB4BP68371 445 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 POU5F1Q01860 360 aaKnown RBP8.3□□□□□ -1.08
VMP1-204ENST00000587259 GOLGA8FQ08AF8 430 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 GOLGA8DPQ0D2H9 430 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 KIF5AQ12840 1032 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 KYAT1Q16773 422 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 ITPRIPL2Q3MIP1 535 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 ARHGAP15Q53QZ3 475 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 TDRD12Q587J7 1177 aaKnown RBP8.3□□□□□ -1.08
VMP1-204ENST00000587259 C9orf57Q5W0N0 161 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 WSCD1Q658N2 575 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms