RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 MORC2Q9Y6X9 1032 aaPredicted RBP17.34■□□□□ 0.37
NPC1-205ENST00000587163 CACNA1EQ15878 2313 aa17.33■□□□□ 0.37
NPC1-205ENST00000587163 CEP192Q8TEP8 1941 aa17.33■□□□□ 0.37
NPC1-205ENST00000587163 EIF3DO15371 548 aaKnown RBP eCLIP17.33■□□□□ 0.36
NPC1-205ENST00000587163 HOXC11O43248 304 aaPredicted RBP17.33■□□□□ 0.36
NPC1-205ENST00000587163 RTN3O95197 1032 aaPredicted RBP17.33■□□□□ 0.36
NPC1-205ENST00000587163 WASP42768 502 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 FAM193AP78312 1265 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 E2F4Q16254 413 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 SNX30Q5VWJ9 437 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 PDZD8Q8NEN9 1154 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 OR2I1PQ8NGU4 316 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 OVCA2Q8WZ82 227 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 ELMO3Q96BJ8 720 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 ERLEC1Q96DZ1 483 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 GTPBP2Q9BX10 602 aaKnown RBP17.33■□□□□ 0.36
NPC1-205ENST00000587163 TNMDQ9H2S6 317 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 SPHK2Q9NRA0 654 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 IL37Q9NZH6 218 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 DEC1Q9P2X7 70 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 SLC6A14Q9UN76 642 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 SH3BP1Q9Y3L3 701 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 NEUROG3Q9Y4Z2 214 aa17.33■□□□□ 0.36
NPC1-205ENST00000587163 BAHCC1Q9P281 2608 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 A0A1W2PQF6 199 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 UPK3BL1B0FP48 263 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 UPK3BL2E5RIL1 263 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 AP5Z1O43299 807 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 STAU1O95793 577 aaKnown RBP17.32■□□□□ 0.36
NPC1-205ENST00000587163 ZDHHC11BP0C7U3 371 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 SIM1P81133 766 aaPredicted RBP17.32■□□□□ 0.36
NPC1-205ENST00000587163 RPL6Q02878 288 aaKnown RBP17.32■□□□□ 0.36
NPC1-205ENST00000587163 COL9A2Q14055 689 aaPredicted RBP17.32■□□□□ 0.36
NPC1-205ENST00000587163 DUOXA1Q1HG43 343 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 ANO4Q32M45 955 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 C10orf76Q5T2E6 689 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 BTBD8Q5XKL5 378 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 NELFCDQ8IXH7 590 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 TERB1Q8NA31 727 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 KCNV2Q8TDN2 545 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 ZCCHC14Q8WYQ9 949 aaKnown RBP17.32■□□□□ 0.36
NPC1-205ENST00000587163 ACOX2Q99424 681 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 SMYD3Q9H7B4 428 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 CAPN10Q9HC96 672 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 GMIPQ9P107 970 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 CALCOCO1Q9P1Z2 691 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 MSRB2Q9Y3D2 182 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 ATRXP46100 2492 aa17.32■□□□□ 0.36
NPC1-205ENST00000587163 DMXL2Q8TDJ6 3036 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 PKD1L2Q7Z442 2459 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 GREM1O60565 184 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 SERPINF2P08697 491 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 NTSR1P30989 418 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 HOXD12P35452 270 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 DPP6P42658 865 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 CASP4P49662 377 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 SLC5A3P53794 718 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 ASIC1P78348 528 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 GFPT1Q06210 699 aaPredicted RBP17.31■□□□□ 0.36
NPC1-205ENST00000587163 ZNF33AQ06730 810 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 TRPC3Q13507 836 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 FAM26FQ5R3K3 315 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 EGFLAMQ63HQ2 1017 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 FAM35AQ86V20 835 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 XXYLT1Q8NBI6 393 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 CEP76Q8TAP6 659 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 PLEKHO2Q8TD55 490 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 SCFD1Q8WVM8 642 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 MED10Q9BTT4 135 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 CD248Q9HCU0 757 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 PCDH15Q96QU1 1955 aa17.31■□□□□ 0.36
NPC1-205ENST00000587163 IGHV1OR15-9A0A0B4J2B8 117 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 FAM92AA1XBS5 289 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 BEST1O76090 585 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 IRF1P10914 325 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 HOXB2P14652 356 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 ATICP31939 592 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 NASPP49321 788 aaPredicted RBP17.3■□□□□ 0.36
NPC1-205ENST00000587163 TUBP50607 506 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 CNNM4Q6P4Q7 775 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 SLC36A4Q6YBV0 504 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 TRMT11Q7Z4G4 463 aaKnown RBP17.3■□□□□ 0.36
NPC1-205ENST00000587163 SLC41A1Q8IVJ1 513 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 FUKQ8N0W3 1084 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 ZMIZ2Q8NF64 920 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 SYAP1Q96A49 352 aaPredicted RBP17.3■□□□□ 0.36
NPC1-205ENST00000587163 DUSP9Q99956 384 aaKnown RBP17.3■□□□□ 0.36
NPC1-205ENST00000587163 LRRC27Q9C0I9 530 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 SDCBP2Q9H190 292 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
NPC1-205ENST00000587163 DMAP1Q9NPF5 467 aaPredicted RBP17.3■□□□□ 0.36
NPC1-205ENST00000587163 STARD13Q9Y3M8 1113 aa17.3■□□□□ 0.36
NPC1-205ENST00000587163 DSPP15924 2871 aaKnown RBP17.29■□□□□ 0.36
NPC1-205ENST00000587163 OPHN1O60890 802 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 TBX18O95935 607 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 CD59P13987 128 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 NDUFV2P19404 249 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 CASP1P29466 404 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 ATXN3P54252 364 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms