RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 UBXN1Q04323 297 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 TAF10Q12962 218 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 USP4Q13107 963 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 NR1H3Q13133 447 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 MTF1Q14872 753 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 ZNF77Q15935 545 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
ERCC2-207ENST00000586441 IRF2BP1Q8IU81 584 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 SPEM1Q8N4L4 309 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 TC2NQ8N9U0 490 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 OSCP1Q8WVF1 389 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 ATP2A3Q93084 1043 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 CYP2S1Q96SQ9 504 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 KCNK16Q96T55 309 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 NUP58Q9BVL2 599 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 VPS16Q9H269 839 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 APOBEC3GQ9HC16 384 aaKnown RBP13.08□□□□□ -0.32
ERCC2-207ENST00000586441 PRMT8Q9NR22 394 aaPredicted RBP13.08□□□□□ -0.32
ERCC2-207ENST00000586441 TMEM30AQ9NV96 361 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 PAXBP1Q9Y5B6 917 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 PCDHGA2Q9Y5H1 932 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 C2orf78A6NCI8 922 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 SLC9A3R1O14745 358 aaPredicted RBP13.07□□□□□ -0.32
ERCC2-207ENST00000586441 P4HA2O15460 535 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 AP1G2O75843 785 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 GNA14O95837 355 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 MTIF2P46199 727 aaKnown RBP13.07□□□□□ -0.32
ERCC2-207ENST00000586441 RAP1GAPP47736 663 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 CCR3P51677 355 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
ERCC2-207ENST00000586441 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 CCINQ13939 588 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 SPOPLQ6IQ16 392 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 SCARA5Q6ZMJ2 495 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 CREBRFQ8IUR6 639 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 GPIHBP1Q8IV16 184 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 CPA6Q8N4T0 437 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 ZNF276Q8N554 614 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 ARL14EPQ8N8R7 260 aaPredicted RBP13.07□□□□□ -0.32
ERCC2-207ENST00000586441 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 CCDC26Q8TAB7 109 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 WHAMMQ8TF30 809 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 SLC35C1Q96A29 364 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 CYFIP2Q96F07 1278 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 ZFYVE19Q96K21 471 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 SLC22A12Q96S37 553 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 TUBGCP2Q9BSJ2 902 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 SMG9Q9H0W8 520 aaKnown RBP13.07□□□□□ -0.32
ERCC2-207ENST00000586441 TRPC7Q9HCX4 862 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 FAM86C1Q9NVL1 165 aa13.07□□□□□ -0.32
ERCC2-207ENST00000586441 NDRG2Q9UN36 371 aaKnown RBP13.07□□□□□ -0.32
ERCC2-207ENST00000586441 HELZP42694 1942 aaKnown RBP13.07□□□□□ -0.32
ERCC2-207ENST00000586441 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 GFRA3O60609 400 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 MFAP3LO75121 409 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 CLSTN1O94985 981 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 CXCL12P48061 93 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 SLC5A3P53794 718 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 MARSP56192 900 aaKnown RBP13.06□□□□□ -0.32
ERCC2-207ENST00000586441 YWHAEP62258 255 aaKnown RBP13.06□□□□□ -0.32
ERCC2-207ENST00000586441 TNK2Q07912 1038 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 MTAPQ13126 283 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 FBXO43Q4G163 708 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 FKBP15Q5T1M5 1219 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 E4F1Q66K89 784 aaPredicted RBP13.06□□□□□ -0.32
ERCC2-207ENST00000586441 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 ZMIZ2Q8NF64 920 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 SLC2A14Q8TDB8 520 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 SH3RF2Q8TEC5 729 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 FBXO32Q969P5 355 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 OTUB2Q96DC9 234 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 EEF2KMTQ96G04 330 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 CNOT6LQ96LI5 555 aaKnown RBP13.06□□□□□ -0.32
ERCC2-207ENST00000586441 C16orf45Q96MC5 204 aaPredicted RBP13.06□□□□□ -0.32
ERCC2-207ENST00000586441 SMOQ99835 787 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 RNF38Q9H0F5 515 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 ECT2Q9H8V3 914 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 KRT82Q9NSB4 513 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 ZSCAN32Q9NX65 697 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 DUS2Q9NX74 493 aaKnown RBP13.06□□□□□ -0.32
ERCC2-207ENST00000586441 TBC1D14Q9P2M4 693 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
ERCC2-207ENST00000586441 E2F8A0AVK6 867 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 LILRB5O75023 590 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 ATG13O75143 517 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 NFATC1O95644 943 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 LMNAP02545 664 aaKnown RBP13.05□□□□□ -0.32
ERCC2-207ENST00000586441 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
ERCC2-207ENST00000586441 DRD1P21728 446 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 TBXAS1P24557 533 aaPredicted RBP13.05□□□□□ -0.32
ERCC2-207ENST00000586441 IFNAR2P48551 515 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 PSEN1P49768 467 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms