RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PVALEFA0A1B0GWK0 134 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 UPK3BL1B0FP48 263 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 UPK3BL2E5RIL1 263 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 CUTAO60888 179 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SPINK2P20155 84 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 CASP4P49662 377 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SLC5A3P53794 718 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 KDSRQ06136 332 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 FOXC1Q12948 553 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 KNOP1Q1ED39 458 aaKnown RBP15.34■□□□□ 0.05
SDF2-202ENST00000585428 UAP1L1Q3KQV9 507 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 PREPLQ4J6C6 727 aaPredicted RBP15.34■□□□□ 0.05
SDF2-202ENST00000585428 HTR3DQ70Z44 454 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 PIP4P1Q86T03 277 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 BBS7Q8IWZ6 715 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 FUKQ8N0W3 1084 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 CRYBG2Q8N1P7 616 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 ZMIZ2Q8NF64 920 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SPDYE1Q8NFV5 336 aaPredicted RBP15.34■□□□□ 0.05
SDF2-202ENST00000585428 PARD3BQ8TEW8 1205 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 TMEM174Q8WUU8 243 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SPACA7Q96KW9 195 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SDCBP2Q9H190 292 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SMYD3Q9H7B4 428 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 CSNK1G1Q9HCP0 422 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 CD248Q9HCU0 757 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SLC39A2Q9NP94 309 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 DMAC2Q9NW81 257 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 DEC1Q9P2X7 70 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 ZMIZ1Q9ULJ6 1067 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 SH3BP1Q9Y3L3 701 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 UBE4BO95155 1302 aa15.34■□□□□ 0.05
SDF2-202ENST00000585428 ZZEF1O43149 2961 aa15.33■□□□□ 0.05
SDF2-202ENST00000585428 A0A1W2PQF6 199 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 TCRBV21S2A2A0A5A6 115 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 TRIM24O15164 1050 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 PHACTR2O75167 634 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 BEST1O76090 585 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 VNN1O95497 513 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 YEATS4O95619 227 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 ENGP17813 658 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 GABRG2P18507 467 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 ITPKAP23677 461 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 CASP1P29466 404 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 HOXD12P35452 270 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 DPP6P42658 865 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 AP3M2P53677 418 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 SEMA3BQ13214 749 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 BTBD8Q5XKL5 378 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 FAM35AQ86V20 835 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 PGBD3Q8N328 593 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 ZNF513Q8N8E2 541 aaPredicted RBP15.33■□□□□ 0.04
SDF2-202ENST00000585428 DEFB124Q8NES8 71 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 TNIP3Q96KP6 325 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 SMOQ99835 787 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 SCNM1Q9BWG6 230 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 KLF16Q9BXK1 252 aaPredicted RBP15.33■□□□□ 0.04
SDF2-202ENST00000585428 MAGEF1Q9HAY2 307 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 DMAP1Q9NPF5 467 aaPredicted RBP15.33■□□□□ 0.04
SDF2-202ENST00000585428 GMIPQ9P107 970 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.04
SDF2-202ENST00000585428 RALYQ9UKM9 306 aaKnown RBP15.33■□□□□ 0.04
SDF2-202ENST00000585428 MYO16Q9Y6X6 1858 aa15.33■□□□□ 0.04
SDF2-202ENST00000585428 KIAA1549LQ6ZVL6 1849 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 LRRIQ3A6PVS8 624 aaPredicted RBP15.32■□□□□ 0.04
SDF2-202ENST00000585428 POLR2DO15514 142 aaKnown RBP15.32■□□□□ 0.04
SDF2-202ENST00000585428 EXOC3O60645 756 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 NTSR1P30989 418 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 NCOA4Q13772 614 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 DUOXA1Q1HG43 343 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 ANO4Q32M45 955 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 ZNF667Q5HYK9 610 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 LYSMD4Q5XG99 296 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 NUDT18Q6ZVK8 323 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 ARMCX6Q7L4S7 300 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 TRMT11Q7Z4G4 463 aaKnown RBP15.32■□□□□ 0.04
SDF2-202ENST00000585428 ACOT1Q86TX2 421 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 MIB1Q86YT6 1006 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 TERB1Q8NA31 727 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 CEP76Q8TAP6 659 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 GATA6Q92908 595 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 ELMO3Q96BJ8 720 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 SMARCD1Q96GM5 515 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 ZNF396Q96N95 335 aaPredicted RBP15.32■□□□□ 0.04
SDF2-202ENST00000585428 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 ADAM33Q9BZ11 813 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 BLZF1Q9H2G9 400 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
SDF2-202ENST00000585428 SLC6A14Q9UN76 642 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 CHD6Q8TD26 2715 aa15.32■□□□□ 0.04
SDF2-202ENST00000585428 ASPMQ8IZT6 3477 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 SPEGQ15772 3267 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 AP5Z1O43299 807 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 AP1G2O75843 785 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 TBX18O95935 607 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 SERPINF2P08697 491 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 CUL4BQ13620 913 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 SGSM1Q2NKQ1 1148 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 ZNF699Q32M78 642 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 SLC36A4Q6YBV0 504 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms