RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SMYD3Q9H7B4 428 aa15.9■□□□□ 0.14
VAPA-209ENST00000585042 SPHK2Q9NRA0 654 aa15.9■□□□□ 0.14
VAPA-209ENST00000585042 SH3BP1Q9Y3L3 701 aa15.9■□□□□ 0.14
VAPA-209ENST00000585042 NUP205Q92621 2012 aa15.9■□□□□ 0.14
VAPA-209ENST00000585042 CHD8Q9HCK8 2581 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 THADAQ6YHU6 1953 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 LNP1A1A4G5 178 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 C4orf47A7E2U8 309 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 SGK1O00141 431 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 MAPK13O15264 365 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 KLRC4O43908 158 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 AP1G2O75843 785 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 VNN1O95497 513 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 TIE1P35590 1138 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 CASP4P49662 377 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 IFRD2Q12894 506 aaPredicted RBP15.89■□□□□ 0.13
VAPA-209ENST00000585042 ZACNQ401N2 412 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 TCEAL6Q6IPX3 200 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 PHTF2Q8N3S3 785 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 TCEAL3Q969E4 200 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 KCTD10Q9H3F6 313 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 TMEM9BQ9NQ34 198 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 TLR8Q9NR97 1041 aaKnown RBP15.89■□□□□ 0.13
VAPA-209ENST00000585042 EXOC1Q9NV70 894 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 DEC1Q9P2X7 70 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 INVSQ9Y283 1065 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 STARD13Q9Y3M8 1113 aa15.89■□□□□ 0.13
VAPA-209ENST00000585042 TBC1D3BA6NDS4 549 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 MAP3K13O43283 966 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 KRT37O76014 449 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 KIF20AO95235 890 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 CEACAM1P13688 526 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 CSRP1P21291 193 aaKnown RBP15.88■□□□□ 0.13
VAPA-209ENST00000585042 BCKDHBP21953 392 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 HOXD12P35452 270 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 ENPEPQ07075 957 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 MESP2Q0VG99 397 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 LMAN2Q12907 356 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 STK4Q13043 487 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 EMC10Q5UCC4 262 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 ACOT1Q86TX2 421 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 C12orf40Q86WS4 652 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 PAGE5Q96GU1 130 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 SMOQ99835 787 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 DNAI2Q9GZS0 605 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 PNPLA8Q9NP80 782 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 FRMD4BQ9Y2L6 1034 aa15.88■□□□□ 0.13
VAPA-209ENST00000585042 MYOFQ9NZM1 2061 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 CDX4O14627 284 aaPredicted RBP15.87■□□□□ 0.13
VAPA-209ENST00000585042 TLR5O60602 858 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 ADAM23O75077 832 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 TULP3O75386 442 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 ASS1P00966 412 aaKnown RBP15.87■□□□□ 0.13
VAPA-209ENST00000585042 HNRNPLP14866 589 aaKnown RBP eCLIP15.87■□□□□ 0.137e-7■■□□□ 12.4
VAPA-209ENST00000585042 ATP5C1P36542 298 aaKnown RBP15.87■□□□□ 0.13
VAPA-209ENST00000585042 DHPSP49366 369 aaPredicted RBP15.87■□□□□ 0.13
VAPA-209ENST00000585042 NDST1P52848 882 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 GOLGA8FQ08AF8 430 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 GOLGA8DPQ0D2H9 430 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 PSAPL1Q6NUJ1 521 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 KLHDC10Q6PID8 442 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 SV2AQ7L0J3 742 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 SYT12Q8IV01 421 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 BBS7Q8IWZ6 715 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 ZNF276Q8N554 614 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 KIAA0895Q8NCT3 520 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 ZMIZ2Q8NF64 920 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 NACA2Q9H009 215 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 SDCBP2Q9H190 292 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 CYLDQ9NQC7 956 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 KRT82Q9NSB4 513 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 GMIPQ9P107 970 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 BCCIPQ9P287 314 aaKnown RBP eCLIP15.87■□□□□ 0.13
VAPA-209ENST00000585042 WDR35Q9P2L0 1181 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 SCML2Q9UQR0 700 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 TRAF3IP3Q9Y228 551 aa15.87■□□□□ 0.13
VAPA-209ENST00000585042 MAP1BP46821 2468 aaKnown RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 ANTXRLA6NF34 631 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 ACTN4O43707 911 aaKnown RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 CALUO43852 315 aaPredicted RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 NR3C1P04150 777 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 CMA1P23946 247 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 DLG4P78352 724 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 IRX4P78413 519 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 NFIL3Q16649 462 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 MAP7D1Q3KQU3 841 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 KMT5BQ4FZB7 885 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 FOXD4L5Q5VV16 416 aaPredicted RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 SLC36A4Q6YBV0 504 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 TTC30AQ86WT1 665 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 TMEM25Q86YD3 366 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 SFTPA1Q8IWL2 248 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 ZNF513Q8N8E2 541 aaPredicted RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 TERB1Q8NA31 727 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 SLC2A14Q8TDB8 520 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 FOXD4L4Q8WXT5 416 aaPredicted RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 PIGKQ92643 395 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 FAXDC2Q96IV6 333 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms