RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 XRCC6P12956 609 aaKnown RBP eCLIP3.59□□□□□ -1.83
VAPA-208ENST00000584796 ADORA2AP29274 412 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 TKTP29401 623 aaKnown RBP3.59□□□□□ -1.83
VAPA-208ENST00000584796 SLC11A2P49281 568 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 DGKEP52429 567 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 E2F1Q01094 437 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 SATB1Q01826 763 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 FAM187BQ17R55 369 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 CCDC157Q569K6 752 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 C10orf25Q5T742 122 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 SHC4Q6S5L8 630 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 SERPINA13PQ6UXR4 307 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 CAND1Q86VP6 1230 aaKnown RBP3.59□□□□□ -1.83
VAPA-208ENST00000584796 SFTPA1Q8IWL2 248 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 IZUMO1Q8IYV9 350 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 PLBD2Q8NHP8 589 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 HPS3Q969F9 1004 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 FYTTD1Q96QD9 318 aaKnown RBP3.59□□□□□ -1.83
VAPA-208ENST00000584796 PRR25Q96S07 402 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 NUP88Q99567 741 aaPredicted RBP3.59□□□□□ -1.83
VAPA-208ENST00000584796 EFHD1Q9BUP0 239 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 TCF7L1Q9HCS4 588 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 TRMT13Q9NUP7 481 aaKnown RBP3.59□□□□□ -1.83
VAPA-208ENST00000584796 STXBP5LQ9Y2K9 1186 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 SNX14Q9Y5W7 946 aa3.59□□□□□ -1.83
VAPA-208ENST00000584796 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.59□□□□□ -1.83
VAPA-208ENST00000584796 RGS12O14924 1447 aa3.59□□□□□ -1.84
VAPA-208ENST00000584796 A2MP01023 1474 aa3.59□□□□□ -1.84
VAPA-208ENST00000584796 NCOA2Q15596 1464 aa3.59□□□□□ -1.84
VAPA-208ENST00000584796 TIAM1Q13009 1591 aa3.59□□□□□ -1.84
VAPA-208ENST00000584796 UGGT1Q9NYU2 1555 aa3.59□□□□□ -1.84
VAPA-208ENST00000584796 MAST1Q9Y2H9 1570 aa3.59□□□□□ -1.84
VAPA-208ENST00000584796 CHD2O14647 1828 aaKnown RBP3.58□□□□□ -1.84
VAPA-208ENST00000584796 A0A087WWL8 130 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 TMEM232C9JQI7 657 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 H3BNC9 293 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 DSCR3O14972 297 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 VNN1O95497 513 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 A1BGP04217 495 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 KCNA3P22001 575 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 ALDH5A1P51649 535 aaPredicted RBP3.58□□□□□ -1.84
VAPA-208ENST00000584796 SRSF1Q07955 248 aaKnown RBP eCLIP3.58□□□□□ -1.84
VAPA-208ENST00000584796 ZNF268Q14587 947 aaPredicted RBP3.58□□□□□ -1.84
VAPA-208ENST00000584796 GPR162Q16538 588 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 LY6KQ17RY6 165 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 ATAT1Q5SQI0 421 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 DPY19L3Q6ZPD9 716 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 ADAMTS18Q8TE60 1221 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 PNISRQ8TF01 805 aaKnown RBP3.58□□□□□ -1.84
VAPA-208ENST00000584796 MMS19Q96T76 1030 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 CGRRF1Q99675 332 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 DPCDQ9BVM2 203 aaPredicted RBP3.58□□□□□ -1.84
VAPA-208ENST00000584796 TFCP2L1Q9NZI6 479 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 LUC7L2Q9Y383 392 aaKnown RBP3.58□□□□□ -1.84
VAPA-208ENST00000584796 TNRQ92752 1358 aa3.58□□□□□ -1.84
VAPA-208ENST00000584796 FAM90A10PA6NDY2 464 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 AP4M1O00189 453 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 FGAP02671 866 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 TMEM191BP0C7N4 346 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 PRF1P14222 555 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 PZPP20742 1482 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 CCKARP32238 428 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 ARFIP2P53365 341 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 PSG6Q00889 435 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 KRT17Q04695 432 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 NWD1Q149M9 1564 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 RBMS2Q15434 407 aaKnown RBP3.57□□□□□ -1.84
VAPA-208ENST00000584796 MGAT5BQ3V5L5 792 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 PIP4P1Q86T03 277 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 CUL5Q93034 780 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 CHMP4CQ96CF2 233 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 MAP3K14Q99558 947 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 KDM5DQ9BY66 1539 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.57□□□□□ -1.84
VAPA-208ENST00000584796 AMFRQ9UKV5 643 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 LRP12Q9Y561 859 aa3.57□□□□□ -1.84
VAPA-208ENST00000584796 ABCC3O15438 1527 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 GPATCH8Q9UKJ3 1502 aaKnown RBP3.56□□□□□ -1.84
VAPA-208ENST00000584796 ZNF644Q9H582 1327 aaPredicted RBP3.56□□□□□ -1.84
VAPA-208ENST00000584796 A0A088AWK7 358 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 MYO1CO00159 1063 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 ADAM10O14672 748 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 VCAM1P19320 739 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 HOXD9P28356 352 aaPredicted RBP3.56□□□□□ -1.84
VAPA-208ENST00000584796 GKP32189 559 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 THBS4P35443 961 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 RAB1AP62820 205 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 GHRHRQ02643 423 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 TRIM71Q2Q1W2 868 aaKnown RBP3.56□□□□□ -1.84
VAPA-208ENST00000584796 MIDNQ504T8 468 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 C4orf46Q504U0 113 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
VAPA-208ENST00000584796 GGT6Q6P531 493 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 DEF8Q6ZN54 512 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 SIRT6Q8N6T7 355 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 LINC01465Q8N7H1 131 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 NSMCE1Q8WV22 266 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 KBTBD7Q8WVZ9 684 aa3.56□□□□□ -1.84
VAPA-208ENST00000584796 C1GALT1C1Q96EU7 318 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms