RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 POPDC2Q9HBU9 364 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 IL37Q9NZH6 218 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 CXXC1Q9P0U4 656 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 TARSL2A2RTX5 802 aaKnown RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 C3orf70A6NLC5 250 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 ZBBXA8MT70 800 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 CPB1P15086 417 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 DESP17661 470 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SLC5A3P53794 718 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 PSMD5Q16401 504 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 CYP1B1Q16678 543 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 OTUD1Q5VV17 481 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 HFE2Q6ZVN8 426 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 ANKS1BQ7Z6G8 1248 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 TEKT4Q8WW24 435 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 MAIP1Q8WWC4 291 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 RIN2Q8WYP3 895 aaPredicted RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 RAPGEF5Q92565 580 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 CLP1Q92989 425 aaKnown RBP14.63□□□□□ -0.07
UBBP4-202ENST00000584755 FAM149B1Q96BN6 582 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 SLC9A7Q96T83 725 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 HERPUD2Q9BSE4 406 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 AP1M1Q9BXS5 423 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 STK39Q9UEW8 545 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 EFR3BQ9Y2G0 817 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 NR2E1Q9Y466 385 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 INSL6Q9Y581 213 aa14.63□□□□□ -0.07
UBBP4-202ENST00000584755 GOLGA6L10A0A0M3HER8 536 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 TCRBV7S2A1N4TA0A589 114 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 FAM92AA1XBS5 289 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 LTFP02788 710 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 KRT1P04264 644 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RARAP10276 462 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 TFE3P19532 575 aaPredicted RBP14.62□□□□□ -0.07
UBBP4-202ENST00000584755 GJC1P36383 396 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 ARSEP51690 589 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 ATP11AP98196 1134 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 ROR1Q01973 937 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 CDO1Q16878 200 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RAB6CQ53S08 254 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 BOLA3Q53S33 107 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RASIP1Q5U651 963 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 MFSD7Q6UXD7 560 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 SPOCD1Q6ZMY3 1216 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RNF19BQ6ZMZ0 732 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 FIBCD1Q8N539 461 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 PRELID2Q8N945 189 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 C12orf50Q8NA57 414 aaPredicted RBP14.62□□□□□ -0.07
UBBP4-202ENST00000584755 ATAD1Q8NBU5 361 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 FAM71BQ8TC56 605 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RUBCNQ92622 972 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 PGAP3Q96FM1 320 aaPredicted RBP14.62□□□□□ -0.07
UBBP4-202ENST00000584755 SPATA17Q96L03 361 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 CEP295NLQ96MC4 621 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 LRRC1Q9BTT6 524 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 OSBPL8Q9BZF1 889 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RAB6CQ9H0N0 254 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 EPC1Q9H2F5 836 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 SLITRK6Q9H5Y7 841 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 NGRNQ9NPE2 291 aaKnown RBP14.62□□□□□ -0.07
UBBP4-202ENST00000584755 AAASQ9NRG9 546 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RRN3Q9NYV6 651 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 HSFX1Q9UBD0 423 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 RAB21Q9UL25 225 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 STAP1Q9ULZ2 295 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 CDY1Q9Y6F8 540 aa14.62□□□□□ -0.07
UBBP4-202ENST00000584755 PLXNA3P51805 1871 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 WDR27A2RRH5 827 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 MDM4O15151 490 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 ADAM12O43184 909 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 PRPSAP2O60256 369 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 TUBBP07437 444 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 RHOXF2BP0C7M4 288 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 HAPLN1P10915 354 aaPredicted RBP14.61□□□□□ -0.07
UBBP4-202ENST00000584755 RALAP11233 206 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 KDELR1P24390 212 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 CETN2P41208 172 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 CDKN2BP42772 138 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 GLUD2P49448 558 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 SMC1AQ14683 1233 aaKnown RBP14.61□□□□□ -0.07
UBBP4-202ENST00000584755 DCAF6Q58WW2 860 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 SYPL2Q5VXT5 272 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 VSIG1Q86XK7 387 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 HERC6Q8IVU3 1022 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 SCN4BQ8IWT1 228 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 NUP93Q8N1F7 819 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 SCAMP5Q8TAC9 235 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
UBBP4-202ENST00000584755 PGLYRP2Q96PD5 576 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 KRT12Q99456 494 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 RAD9AQ99638 391 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 CLSTN3Q9BQT9 956 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 RHOXF2Q9BQY4 288 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 TRIM62Q9BVG3 475 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 CRISPLD1Q9H336 500 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 ZWILCHQ9H900 591 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.61□□□□□ -0.07
UBBP4-202ENST00000584755 COMMD8Q9NX08 183 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 CALCOCO1Q9P1Z2 691 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 PCSK1NQ9UHG2 260 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms