RNA–Protein interactions for RNA: ENST00000583972.1

SUPT6H-209, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 1,969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-209ENST00000583972 RNF43Q68DV7 783 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 BBS12Q6ZW61 710 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 LRRC8DQ7L1W4 858 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 DENND1AQ8TEH3 1009 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 HAUS1Q96CS2 278 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 C16orf70Q9BSU1 422 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 BCO2Q9BYV7 579 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 VPS37BQ9H9H4 285 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 KLHL14Q9P2G3 628 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 AGAP1Q9UPQ3 857 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 SMG5Q9UPR3 1016 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 GOLGA8SH3BPF8 625 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 TRANK1O15050 2925 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 IFNB1P01574 187 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 CD19P15391 556 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 SELPP16109 830 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 KDELR1P24390 212 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 FOXN2P32314 431 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 RDXP35241 583 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 WDR4P57081 412 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 NCALDP61601 193 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 OTUD4Q01804 1114 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 ADCY1Q08828 1119 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 PDIA2Q13087 525 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 ADGRE1Q14246 886 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 TAZQ16635 292 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 TRIM71Q2Q1W2 868 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 CGB2Q6NT52 195 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 FAM228AQ86W67 206 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 TRIM50Q86XT4 487 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 ARFGAP1Q8N6T3 406 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 ACTL9Q8TC94 416 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 TRABDQ9H4I3 376 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 FETUBQ9UGM5 382 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 CYTH4Q9UIA0 394 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 POLIQ9UNA4 740 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 TNFSF13BQ9Y275 285 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 PCDHA11Q9Y5I1 949 aa12.84□□□□□ -0.35
SUPT6H-209ENST00000583972 POC1B-GALNT4F8VUJ3 575 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 LGALS2P05162 132 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 CKBP12277 381 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 IL1R2P27930 398 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC8A1P32418 973 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC26A2P50443 739 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 RAD23BP54727 409 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 RIPK1Q13546 671 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 ZNF268Q14587 947 aaPredicted RBP12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 ZKSCAN8Q15776 578 aaPredicted RBP12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 HIF1AQ16665 826 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 RGS9BPQ6ZS82 235 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 PPIL6Q8IXY8 311 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 JOSD2Q8TAC2 188 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 GAS2L1Q99501 681 aaPredicted RBP12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 COL25A1Q9BXS0 654 aaPredicted RBP12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 PITPNM3Q9BZ71 974 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 ZWILCHQ9H900 591 aa12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 RPF1Q9H9Y2 349 aaKnown RBP12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 PSMC3IPQ9P2W1 217 aaPredicted RBP12.83□□□□□ -0.35
SUPT6H-209ENST00000583972 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 SMAPO00193 183 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 CST8O60676 142 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 NBNO60934 754 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 CA3P07451 260 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 KRT19P08727 400 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 KRT15P19012 456 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 ARL4CP56559 192 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 OSTNP61366 133 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 MYO1EQ12965 1108 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 SPARCL1Q14515 664 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 ACAP1Q15027 740 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 SMTNL2Q2TAL5 461 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 EFHC2Q5JST6 749 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 WLSQ5T9L3 541 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 TBC1D1Q86TI0 1168 aaPredicted RBP12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 XYLT1Q86Y38 959 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 KIAA0319LQ8IZA0 1049 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 CEP120Q8N960 986 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 SMC6Q96SB8 1091 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 CPXM1Q96SM3 734 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 SLC9A7Q96T83 725 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 ECT2Q9H8V3 914 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 SSU72Q9NP77 194 aaKnown RBP12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 SIX4Q9UIU6 781 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 GGT7Q9UJ14 662 aa12.83□□□□□ -0.36
SUPT6H-209ENST00000583972 STARD13Q9Y3M8 1113 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms