RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RNF8O76064 485 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 HSPA6P17066 643 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 MCL1Q07820 350 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 DDX10Q13206 875 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 PIN1Q13526 163 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 LARS2Q15031 903 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 CACHD1Q5VU97 1274 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 LINC01465Q8N7H1 131 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 JPH3Q8WXH2 748 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 CTHRC1Q96CG8 243 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 VCPIP1Q96JH7 1222 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 FOXP1Q9H334 677 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 TMEM184CQ9NVA4 438 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 PNMA8BQ9ULN7 279 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 USP22Q9UPT9 525 aa4.96□□□□□ -1.62
SMCHD1-208ENST00000583344 AQRO60306 1485 aaKnown RBP eCLIP4.95□□□□□ -1.622e-6■■■■■ 28
SMCHD1-208ENST00000583344 WDR97A6NE52 1622 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 H3BNC9 293 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 TBX3O15119 743 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 PHGDHO43175 533 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 RASAL1O95294 804 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 EN2P19622 333 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 SLC7A1P30825 629 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 PRKAR1BP31321 381 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 UQCRC1P31930 480 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 ITGA8P53708 1063 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 HTRA4P83105 476 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 GPR162Q16538 588 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 TMTC4Q5T4D3 741 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 DCDC5Q6ZRR9 648 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 PIP4P1Q86T03 277 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 IL31RAQ8NI17 732 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 SLC35G2Q8TBE7 412 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 NSMCE1Q8WV22 266 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 WDYHV1Q96HA8 205 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 ZBTB45Q96K62 511 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 AIFM3Q96NN9 605 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 SIGLEC11Q96RL6 698 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 VN1R3Q9BXE9 311 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 B3GNT5Q9BYG0 378 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 DNMT3BQ9UBC3 853 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 ZNF180Q9UJW8 692 aa4.95□□□□□ -1.62
SMCHD1-208ENST00000583344 RIMBP3CA6NJZ7 1639 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 RIMBP3BA6NNM3 1639 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 RIMBP3Q9UFD9 1639 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 CCDC187A0A096LP49 1063 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 H7C4K7 107 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 ANP32CO43423 234 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 TMEM191BP0C7N4 346 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 HGFP14210 728 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 PHKG2P15735 406 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 CREB1P16220 341 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 SCP2P22307 547 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 EPHA3P29320 983 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 THBS4P35443 961 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 MTHFSP49914 203 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 AGFG1P52594 562 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 TTF1Q15361 905 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 ANO6Q4KMQ2 910 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 SWSAP1Q6NVH7 229 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 NPNTQ6UXI9 565 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 OVCH2Q7RTZ1 564 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 RAB11FIP4Q86YS3 637 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 ADAMTS15Q8TE58 950 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 PPP1R9BQ96SB3 815 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 SIN3AQ96ST3 1273 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 SNX15Q9NRS6 342 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 STK32BQ9NY57 414 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 PI4KBQ9UBF8 816 aa4.94□□□□□ -1.62
SMCHD1-208ENST00000583344 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 M0R3H8 397 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 CD3EAPO15446 510 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 AKAP10O43572 662 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 RGS10O43665 173 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 ATF7P17544 494 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 TIRAPP58753 221 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 CFHR1Q03591 330 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 PRDM2Q13029 1718 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 KCNB1Q14721 858 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 EPM2AIP1Q7L775 607 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 MICU3Q86XE3 530 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 LIX1LQ8IVB5 337 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 ZNF548Q8NEK5 533 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 SPSB4Q96A44 273 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 HS6ST2Q96MM7 605 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 TRIM5Q9C035 493 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 ZNF518BQ9C0D4 1074 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 A1CFQ9NQ94 594 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 XPNPEP3Q9NQH7 507 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 MGAT4CQ9UBM8 478 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 HEY2Q9UBP5 337 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 NOP58Q9Y2X3 529 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 LRP12Q9Y561 859 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 LAMC3Q9Y6N6 1575 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 FGD5Q6ZNL6 1462 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 USP19O94966 1318 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 CNTNAP2Q9UHC6 1331 aa4.93□□□□□ -1.62
SMCHD1-208ENST00000583344 ZMYM2Q9UBW7 1377 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 CASKIN1Q8WXD9 1431 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms