RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 SIX6OS1Q8N1H7 587 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 THEM5Q8N1Q8 247 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 ZBTB9Q96C00 473 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 LRRC45Q96CN5 670 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 PCED1BQ96HM7 432 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 RTP3Q9BQQ7 232 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 ACBD6Q9BR61 282 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 RAB6CQ9H0N0 254 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 ELAC1Q9H777 363 aaKnown RBP15.3■□□□□ 0.04
MKS1-211ENST00000581761 TBC1D13Q9NVG8 400 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.3■□□□□ 0.04
MKS1-211ENST00000581761 PCDHB8Q9UN66 801 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 PCDHB7Q9Y5E2 793 aa15.3■□□□□ 0.04
MKS1-211ENST00000581761 TSC2P49815 1807 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 GOLGA6BA6NDN3 693 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 H3BQF6 201 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 B4GALT3O60512 393 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 DDHD2O94830 711 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 ITGB1P05556 798 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 OR1G1P47890 313 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 CDH6P55285 790 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
MKS1-211ENST00000581761 FPGSQ05932 587 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 DSC1Q08554 894 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 ADCY1Q08828 1119 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 TAZQ16635 292 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 HSP90B2PQ58FF3 399 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 ALS2CLQ60I27 953 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 ARCQ7LC44 396 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 COLGALT2Q8IYK4 626 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 CMASQ8NFW8 434 aaPredicted RBP15.29■□□□□ 0.04
MKS1-211ENST00000581761 APBB2Q92870 758 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 FAM149B1Q96BN6 582 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 HAUS1Q96CS2 278 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 SMARCD1Q96GM5 515 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 SMOQ99835 787 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 DDX23Q9BUQ8 820 aaKnown RBP15.29■□□□□ 0.04
MKS1-211ENST00000581761 GRHL1Q9NZI5 618 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 ASIC3Q9UHC3 531 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 LRFN2Q9ULH4 789 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 EFR3BQ9Y2G0 817 aa15.29■□□□□ 0.04
MKS1-211ENST00000581761 F8W810 466 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 LIASO43766 372 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 FBXO21O94952 628 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 CD48P09326 243 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 ACRP10323 421 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 SULT1E1P49888 294 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 TKTL1P51854 596 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 RABGGTBP53611 331 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 PLTPP55058 493 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 DYNLT1P63172 113 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 MRPS5P82675 430 aaKnown RBP15.28■□□□□ 0.04
MKS1-211ENST00000581761 TSPY1Q01534 308 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 LMNB2Q03252 620 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 SHHQ15465 462 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 TRIP13Q15645 432 aaPredicted RBP15.28■□□□□ 0.04
MKS1-211ENST00000581761 BOLA3Q53S33 107 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 CFAP58Q5T655 872 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 ZDHHC24Q6UX98 284 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 BBS12Q6ZW61 710 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 CYP4V2Q6ZWL3 525 aaPredicted RBP15.28■□□□□ 0.04
MKS1-211ENST00000581761 ABI1Q8IZP0 508 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 DEFB106AQ8N104 65 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 TMEM199Q8N511 208 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 TEKT4Q8WW24 435 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 NDRG1Q92597 394 aaKnown RBP15.28■□□□□ 0.04
MKS1-211ENST00000581761 RUFY1Q96T51 708 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 TBCBQ99426 244 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 FMO2Q99518 471 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 CALN1Q9BXU9 219 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 ZDHHC18Q9NUE0 388 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.28■□□□□ 0.04
MKS1-211ENST00000581761 GPATCH2LQ9NWQ4 482 aa15.28■□□□□ 0.04
MKS1-211ENST00000581761 MTRF1LQ9UGC7 380 aaKnown RBP15.28■□□□□ 0.04
MKS1-211ENST00000581761 PRG3Q9Y2Y8 225 aaPredicted RBP15.28■□□□□ 0.04
MKS1-211ENST00000581761 COL6A3P12111 3177 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 TMEM189-UBE2V1I3L0A0 370 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 CST8O60676 142 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 ATF2P15336 505 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 NDUFV1P49821 464 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 ARSEP51690 589 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 VCPP55072 806 aaKnown RBP15.27■□□□□ 0.04
MKS1-211ENST00000581761 HDAC4P56524 1084 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 PDK2Q15119 407 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 FAM171BQ6P995 826 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 DRICH1Q6PGQ1 229 aaPredicted RBP15.27■□□□□ 0.04
MKS1-211ENST00000581761 FAM43BQ6ZT52 329 aaPredicted RBP15.27■□□□□ 0.04
MKS1-211ENST00000581761 ZNF365Q70YC5 407 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 GSTA5Q7RTV2 222 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 TTC13Q8NBP0 860 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 ZMIZ2Q8NF64 920 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 FAM71BQ8TC56 605 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 TMEM209Q96SK2 561 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 SNRNP25Q9BV90 132 aaKnown RBP15.27■□□□□ 0.04
MKS1-211ENST00000581761 MAK16Q9BXY0 300 aaKnown RBP15.27■□□□□ 0.04
MKS1-211ENST00000581761 FRMD8P1Q9BZ68 369 aaPredicted RBP15.27■□□□□ 0.04
MKS1-211ENST00000581761 ULBP1Q9BZM6 244 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 FAM129AQ9BZQ8 928 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms