RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SEC24AO95486 1093 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CNPP09543 421 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PRLRP16471 622 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TCP1P17987 556 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DNAJB1P25685 340 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CXCR5P32302 372 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CCDC14Q49A88 953 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PLPP4Q5VZY2 271 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CC2D1AQ6P1N0 951 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 UBL4BQ8N7F7 174 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 KRT35Q92764 455 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SPATA17Q96L03 361 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CFAP57Q96MR6 1250 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PBX4Q9BYU1 374 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CYP4F11Q9HBI6 524 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 POPDC2Q9HBU9 364 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.5□□□□□ -0.094e-8■□□□□ 8
CDK5RAP3-219ENST00000580670 HSFX1Q9UBD0 423 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 KCNK3O14649 394 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DDX3YO15523 660 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 LTFP02788 710 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DESP17661 470 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CTNNA2P26232 953 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ELF1P32519 619 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CTNNA1P35221 906 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MATKP42679 507 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ERVK-21P61565 698 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TUBB2AQ13885 445 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SMC1AQ14683 1233 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ACAP1Q15027 740 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 C15orf59Q2T9L4 293 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DENND5BQ6ZUT9 1274 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 BHLHA9Q7RTU4 235 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DEFB106AQ8N104 65 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GIPC2Q8TF65 315 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GOLGA1Q92805 767 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DDX23Q9BUQ8 820 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TUBB2BQ9BVA1 445 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FBXO44Q9H4M3 255 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MSRAQ9UJ68 235 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CDC23Q9UJX2 597 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MRFAP1Q9Y605 127 aa14.49□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CCDC66A2RUB6 948 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 C2orf71A6NGG8 1288 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PRRG1O14668 218 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CAPN9O14815 690 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ZNF185O15231 689 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GRM6O15303 877 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RNF8O76064 485 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RTN3O95197 1032 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ADH1AP07327 375 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ATF6P18850 670 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MARCKSL1P49006 195 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TAS2R40P59535 323 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 USP46P62068 366 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ATP11AP98196 1134 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TERF2Q15554 542 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RAB30Q15771 203 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CDO1Q16878 200 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DCAF6Q58WW2 860 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SH3PXD2AQ5TCZ1 1133 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RHOT1Q8IXI2 618 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MRPL43Q8N983 215 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MICAL1Q8TDZ2 1067 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 COG1Q8WTW3 980 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ALG3Q92685 438 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 KLHL5Q96PQ7 755 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SLC2A13Q96QE2 648 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 EMILIN2Q9BXX0 1053 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NKX2-4Q9H2Z4 354 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SCML2Q9UQR0 700 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PCDHA3Q9Y5H8 950 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 IRAK3Q9Y616 596 aa14.48□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SLC38A8A6NNN8 435 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PSTPIP1O43586 416 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 LPXNO60711 386 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 LRCH4O75427 683 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TCF4P15884 667 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NOS2P35228 1153 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GJC1P36383 396 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PTPN9P43378 593 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GPM6BQ13491 265 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MTMR3Q13615 1198 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 BSPRYQ5W0U4 402 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TCEAL8Q8IYN2 117 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ARFGAP1Q8N6T3 406 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FAM172AQ8WUF8 416 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PBKQ96KB5 322 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CAPZA3Q96KX2 299 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CEP295NLQ96MC4 621 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CERS4Q9HA82 394 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NGRNQ9NPE2 291 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 IL37Q9NZH6 218 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NAALADL1Q9UQQ1 740 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 YIPF1Q9Y548 306 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 HIDE1A8MVS5 230 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FSCN2O14926 492 aa14.47□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TGM5O43548 720 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms