RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SEMA4GQ9NTN9 838 aa26.25■■□□□ 1.79
CDC42EP4-205ENST00000580315 ARHGAP26Q9UNA1 814 aa26.25■■□□□ 1.79
CDC42EP4-205ENST00000580315 CACNA1BQ00975 2339 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 ERCC5P28715 1186 aaPredicted RBP26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 SLC8A3P57103 927 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 TNK2Q07912 1038 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 CCINQ13939 588 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 MTF1Q14872 753 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 ITPRIPL2Q3MIP1 535 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 DPCR1Q3MIW9 517 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 PPM1KQ8N3J5 372 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 EHBP1Q8NDI1 1231 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 NETO1Q8TDF5 533 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 DUSP16Q9BY84 665 aa26.24■■□□□ 1.79
CDC42EP4-205ENST00000580315 FAM92AA1XBS5 289 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 TCF3P15923 654 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 USP4Q13107 963 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 PDGFRLQ15198 375 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 ZNF77Q15935 545 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 ARHGAP17Q68EM7 881 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 SYNPOQ8N3V7 929 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 GPT2Q8TD30 523 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 SH3RF2Q8TEC5 729 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 JAKMIP2Q96AA8 810 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 MED15Q96RN5 788 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 FAM83CQ9BQN1 747 aa26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 CHORDC1Q9UHD1 332 aaPredicted RBP26.23■■□□□ 1.79
CDC42EP4-205ENST00000580315 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 SLC30A4O14863 429 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 OAS1P00973 400 aaKnown RBP26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 HOXA6P31267 233 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 HOXC13P31276 330 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 SLC7A9P82251 487 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 CSRP2Q16527 193 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 CT47A1Q5JQC4 288 aaPredicted RBP26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 HECTD3Q5T447 861 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 SNX30Q5VWJ9 437 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 FAM114A1Q8IWE2 563 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 LMO3Q8TAP4 145 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 THAP9Q9H5L6 903 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 GMIPQ9P107 970 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 KIAA1257Q9ULG3 409 aa26.22■■□□□ 1.79
CDC42EP4-205ENST00000580315 OLFM2O95897 454 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 CD19P15391 556 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 ACO1P21399 889 aaKnown RBP26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 IFNAR2P48551 515 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 GCNT1Q02742 428 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 RUNX3Q13761 415 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 SGO2Q562F6 1265 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 PRR23CQ6ZRP0 262 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 UBR7Q8N806 425 aa26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 INTS2Q9H0H0 1204 aaKnown RBP26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 TLR8Q9NR97 1041 aaKnown RBP26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 DUS2Q9NX74 493 aaKnown RBP26.21■■□□□ 1.79
CDC42EP4-205ENST00000580315 HHLA1C9JL84 531 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 MBD3O95983 291 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 MBL2P11226 248 aaPredicted RBP26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 MTIF2P46199 727 aaKnown RBP26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 TUBP50607 506 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 AMPD2Q01433 879 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 TMEM270Q6UE05 265 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 DDX42Q86XP3 938 aaKnown RBP eCLIP26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 ANKRD52Q8NB46 1076 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 RIN3Q8TB24 985 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 OSCP1Q8WVF1 389 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 RNF38Q9H0F5 515 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 EBF3Q9H4W6 596 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 HESX1Q9UBX0 185 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 SCML2Q9UQR0 700 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 PCDHB4Q9Y5E5 795 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 CPQQ9Y646 472 aa26.2■■□□□ 1.78
CDC42EP4-205ENST00000580315 LEFTY2O00292 366 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 ZDHHC11BP0C7U3 371 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 VDRP11473 427 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 TRIM68Q6AZZ1 485 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 CEP68Q76N32 757 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 GPRIN1Q7Z2K8 1008 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 WDR5BQ86VZ2 330 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 CPA6Q8N4T0 437 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 FAM160A2Q8N612 972 aaPredicted RBP26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 UBXN6Q9BZV1 441 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 NACA2Q9H009 215 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 HPS4Q9NQG7 708 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 KMT2BQ9UMN6 2715 aaPredicted RBP26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 OBSL1O75147 1896 aa26.19■■□□□ 1.78
CDC42EP4-205ENST00000580315 GREB1Q4ZG55 1949 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 GDF9O60383 454 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 ADRB1P08588 477 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 PAEPP09466 180 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 GOLGA7BQ2TAP0 167 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 RRAGAQ7L523 313 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 IRF2BP1Q8IU81 584 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 KIAA1958Q8N8K9 716 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 ATP2A3Q93084 1043 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 SMPD4Q9NXE4 827 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 TSPAN16Q9UKR8 245 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 DENND4CQ5VZ89 1909 aa26.18■■□□□ 1.78
CDC42EP4-205ENST00000580315 COCHO43405 550 aa26.17■■□□□ 1.78
CDC42EP4-205ENST00000580315 KIF11P52732 1056 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms