RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 WDR35Q9P2L0 1181 aa18.97■□□□□ 0.63
MKS1-209ENST00000580127 USP24Q9UPU5 2620 aa18.97■□□□□ 0.63
MKS1-209ENST00000580127 TMEM8BA6NDV4 472 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 PATE3B3GLJ2 98 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 CDX4O14627 284 aaPredicted RBP18.96■□□□□ 0.63
MKS1-209ENST00000580127 SCAMP3O14828 347 aaKnown RBP18.96■□□□□ 0.63
MKS1-209ENST00000580127 GIPC1O14908 333 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 POLR2DO15514 142 aaKnown RBP18.96■□□□□ 0.63
MKS1-209ENST00000580127 HOXC11O43248 304 aaPredicted RBP18.96■□□□□ 0.63
MKS1-209ENST00000580127 RPN1P04843 607 aaKnown RBP18.96■□□□□ 0.63
MKS1-209ENST00000580127 GFPT1Q06210 699 aaPredicted RBP18.96■□□□□ 0.63
MKS1-209ENST00000580127 UNQ6494/PRO21346Q6UXR6 183 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 HDDC3Q8N4P3 179 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 NAT16Q8N8M0 369 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 ZNF516Q92618 1163 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 XYLT2Q9H1B5 865 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 LSM7Q9UK45 103 aaKnown RBP18.96■□□□□ 0.63
MKS1-209ENST00000580127 CEP295Q9C0D2 2601 aa18.96■□□□□ 0.63
MKS1-209ENST00000580127 MYH10P35580 1976 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 ZNF217O75362 1048 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 TULP3O75386 442 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 AP1G2O75843 785 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 CFIP05156 583 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 NTSR1P30989 418 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 CACNA2D1P54289 1103 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 NCOA4Q13772 614 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 DUOXA1Q1HG43 343 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 C10orf76Q5T2E6 689 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 SLC23A3Q6PIS1 610 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 CEP57L1Q8IYX8 460 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 SCAMP5Q8TAC9 235 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 TAF4BQ92750 862 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 SLC39A2Q9NP94 309 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.95■□□□□ 0.62
MKS1-209ENST00000580127 IL37Q9NZH6 218 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 SLC6A14Q9UN76 642 aa18.95■□□□□ 0.62
MKS1-209ENST00000580127 ATP5C1P36542 298 aaKnown RBP18.94■□□□□ 0.62
MKS1-209ENST00000580127 SLC5A3P53794 718 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 CDH8P55286 799 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 RPL6Q02878 288 aaKnown RBP18.94■□□□□ 0.62
MKS1-209ENST00000580127 BMT2Q1RMZ1 405 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 MAP7D1Q3KQU3 841 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 GRAMD4Q6IC98 578 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 HTR3DQ70Z44 454 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 ARMCX6Q7L4S7 300 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 FAM35AQ86V20 835 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 C12orf40Q86WS4 652 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 PARD3BQ8TEW8 1205 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 CCSER2Q9H7U1 834 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 FOXD4L1Q9NU39 408 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 PCNX2A6NKB5 2137 aa18.94■□□□□ 0.62
MKS1-209ENST00000580127 K7ELQ4 463 aaPredicted RBP18.93■□□□□ 0.62
MKS1-209ENST00000580127 ADAM23O75077 832 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 SYPP08247 313 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 HOXB2P14652 356 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 HNRNPLP14866 589 aaKnown RBP eCLIP18.93■□□□□ 0.62
MKS1-209ENST00000580127 ENGP17813 658 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 PTGER3P43115 390 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 MAPK8P45983 427 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 ME1P48163 572 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 HNRNPDQ14103 355 aaKnown RBP18.93■□□□□ 0.62
MKS1-209ENST00000580127 E2F5Q15329 346 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 SHC4Q6S5L8 630 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 ACOT1Q86TX2 421 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 UNC93AQ86WB7 457 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 TMEM25Q86YD3 366 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 BBS7Q8IWZ6 715 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 ETFBKMTQ8IXQ9 262 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 CRYBG2Q8N1P7 616 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 TERB1Q8NA31 727 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 SMYD3Q9H7B4 428 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 TMEM30AQ9NV96 361 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 GMIPQ9P107 970 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 PILRBQ9UKJ0 227 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 STARD13Q9Y3M8 1113 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 NME7Q9Y5B8 376 aa18.93■□□□□ 0.62
MKS1-209ENST00000580127 ASCC3Q8N3C0 2202 aaKnown RBP18.93■□□□□ 0.62
MKS1-209ENST00000580127 CHD6Q8TD26 2715 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 FAM92AA1XBS5 289 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 UPK3BL1B0FP48 263 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 UPK3BL2E5RIL1 263 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 TLR5O60602 858 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 SERPINF2P08697 491 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 ZDHHC11BP0C7U3 371 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 IRF1P10914 325 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 AFMP43652 599 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 CLDN10P78369 228 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 EHHADHQ08426 723 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 ATL3Q6DD88 541 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 TADA2BQ86TJ2 420 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 SFTPA1Q8IWL2 248 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 CHPFQ8IZ52 775 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 KDF1Q8NAX2 398 aaPredicted RBP18.92■□□□□ 0.62
MKS1-209ENST00000580127 DEFB124Q8NES8 71 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 BBS2Q9BXC9 721 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 ADAM33Q9BZ11 813 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 BLZF1Q9H2G9 400 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 KRT82Q9NSB4 513 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 DNAJC17Q9NVM6 304 aaKnown RBP18.92■□□□□ 0.62
MKS1-209ENST00000580127 MBD1Q9UIS9 605 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms