RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ITGA2BP08514 1039 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 FTH1P19P0C7X4 201 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 RARBP10826 455 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 NPR1P16066 1061 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PTPN1P18031 435 aaKnown RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CST5P28325 142 aaPredicted RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PLA2G5P39877 138 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PIK3CAP42336 1068 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 POLD2P49005 469 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 AARSP49588 968 aaKnown RBP eCLIP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 SNX16P57768 344 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CDC42EP1Q00587 391 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ROM1Q03395 351 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CHRNDQ07001 517 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 MGAT2Q10469 447 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CDC16Q13042 620 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ERV3-1Q14264 604 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 NOMO1Q15155 1222 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 TTC31Q49AM3 519 aaPredicted RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 KHDC1Q4VXA5 237 aaKnown RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CCDC178Q5BJE1 867 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 C3orf38Q5JPI3 329 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PRAMEF9Q5VWM5 478 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ARL6IP4Q66PJ3 421 aaKnown RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 SULT6B1Q6IMI4 303 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 SLC30A6Q6NXT4 461 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 KANSL1Q7Z3B3 1105 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 KDELC2Q7Z4H8 507 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 GATAD2AQ86YP4 633 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 LYSMD2Q8IV50 215 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 RHOT1Q8IXI2 618 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ZBTB8BQ8NAP8 495 aaPredicted RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 HIPK4Q8NE63 616 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 OR6B3Q8NGW1 331 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 BRIX1Q8TDN6 353 aaKnown RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 AFG1LQ8WV93 481 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 KBTBD7Q8WVZ9 684 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ST8SIA4Q92187 359 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 HIC2Q96JB3 615 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CLPTM1LQ96KA5 538 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 SNX22Q96L94 193 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PDCD2LQ9BRP1 358 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 SLC46A2Q9BY10 475 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 TXLNGYQ9BZA5 131 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PDCL3Q9H2J4 239 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PRDM12Q9H4Q4 367 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 WDCPQ9H6R7 721 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 TDP1Q9NUW8 608 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CALCOCO1Q9P1Z2 691 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 COL20A1Q9P218 1284 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ABCF2Q9UG63 623 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 SCOCQ9UIL1 159 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 FEM1BQ9UK73 627 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ODF2LQ9ULJ1 636 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 USP18Q9UMW8 372 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 PAXBP1Q9Y5B6 917 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 TOP2AP11388 1531 aaKnown RBP3.47□□□□□ -1.85
KPNB1-208ENST00000580019 ABCC2Q92887 1545 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 STRCQ7RTU9 1775 aa3.47□□□□□ -1.85
KPNB1-208ENST00000580019 CFAP43Q8NDM7 1665 aa3.46□□□□□ -1.85
KPNB1-208ENST00000580019 UBE2QL1A1L167 161 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 FAM234BA2RU67 622 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 FAM90A27PA6NNH2 459 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 PIP5K1BO14986 540 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 PCDH8O95206 1070 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 TNFRSF6BO95407 300 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 MT-ND5P03915 603 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 CTSSP25774 331 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 AOAHP28039 575 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 TKTP29401 623 aaKnown RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 ACTN2P35609 894 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 NRG3P56975 720 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SESN2P58004 480 aaPredicted RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 ACTR2P61160 394 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SLC6A3Q01959 620 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 PPARAQ07869 468 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SLC12A1Q13621 1099 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 RAB39AQ14964 217 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 WTAPQ15007 396 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SLC44A4Q53GD3 710 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 DCAF17Q5H9S7 520 aaPredicted RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SLC10A5Q5PT55 438 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 KANK2Q63ZY3 851 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SLFN12LQ6IEE8 588 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 GADL1Q6ZQY3 521 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 B4GALNT4Q76KP1 1039 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 RSPH3Q86UC2 560 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 IQCA1Q86XH1 822 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 GALNT13Q8IUC8 556 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 NGEFQ8N5V2 710 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 CDYL2Q8N8U2 506 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 GLB1L3Q8NCI6 653 aaPredicted RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 PDPRQ8NCN5 879 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 OR6Y1Q8NGX8 325 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SSH3Q8TE77 659 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 TBC1D22AQ8WUA7 517 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 STYXQ8WUJ0 223 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 GAB3Q8WWW8 586 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 THAP4Q8WY91 577 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms