RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 FAM81BQ96LP2 452 aa17.21■□□□□ 0.35
RARA-209ENST00000579727 PCMTD1Q96MG8 357 aaPredicted RBP17.21■□□□□ 0.35
RARA-209ENST00000579727 PRRX2Q99811 253 aa17.21■□□□□ 0.35
RARA-209ENST00000579727 ULBP1Q9BZM6 244 aa17.21■□□□□ 0.35
RARA-209ENST00000579727 KIF9Q9HAQ2 790 aa17.21■□□□□ 0.35
RARA-209ENST00000579727 CBX8Q9HC52 389 aa17.21■□□□□ 0.35
RARA-209ENST00000579727 TLR8Q9NR97 1041 aaKnown RBP17.21■□□□□ 0.35
RARA-209ENST00000579727 FAM207AQ9NSI2 230 aaPredicted RBP17.21■□□□□ 0.35
RARA-209ENST00000579727 SCML2Q9UQR0 700 aa17.21■□□□□ 0.35
RARA-209ENST00000579727 FAM170AA1A519 330 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 SOBPA7XYQ1 873 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 LGALS16A8MUM7 142 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 ARNTLO00327 626 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 FOXN3O00409 490 aaPredicted RBP17.2■□□□□ 0.34
RARA-209ENST00000579727 MDM4O15151 490 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 EPHB6O15197 1021 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 CHADO15335 359 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 OLFM2O95897 454 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 TBX18O95935 607 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 SETSIPP0DME0 302 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 LCP1P13796 627 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 PLA2G4AP47712 749 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 ADIGQ0VDE8 80 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 ZNF268Q14587 947 aaPredicted RBP17.2■□□□□ 0.34
RARA-209ENST00000579727 MTF1Q14872 753 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 DRAP1Q14919 205 aaPredicted RBP17.2■□□□□ 0.34
RARA-209ENST00000579727 SYCP1Q15431 976 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 RAB41Q5JT25 222 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 HECTD3Q5T447 861 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 SCD5Q86SK9 330 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 SUGP1Q8IWZ8 645 aaKnown RBP17.2■□□□□ 0.34
RARA-209ENST00000579727 CSGALNACT1Q8TDX6 532 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 FOXQ1Q9C009 403 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 NACA2Q9H009 215 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 GANQ9H2C0 597 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 TBC1D17Q9HA65 648 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 LRRC4Q9HBW1 653 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 GTSE1Q9NYZ3 720 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 NAGPAQ9UK23 515 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 ARHGAP26Q9UNA1 814 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 WNT6Q9Y6F9 365 aa17.2■□□□□ 0.34
RARA-209ENST00000579727 LEFTY2O00292 366 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 TLR5O60602 858 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 IRF1P10914 325 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 UCHL3P15374 230 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 PDE6CP51160 858 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 UBXN1Q04323 297 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 ARHGAP29Q52LW3 1261 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 PMF1Q6P1K2 205 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 CCDC186Q7Z3E2 898 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 PASD1Q8IV76 773 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 ZNF606Q8WXB4 792 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 DNASE1L2Q92874 299 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 UBXN6Q9BZV1 441 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 EBF3Q9H4W6 596 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 GKN1Q9NS71 199 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 THG1LQ9NWX6 298 aaKnown RBP17.19■□□□□ 0.34
RARA-209ENST00000579727 USP3Q9Y6I4 520 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 PIAS3Q9Y6X2 628 aa17.19■□□□□ 0.34
RARA-209ENST00000579727 MIA3Q5JRA6 1907 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 PI15O43692 258 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 RARGP13631 454 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 ARSAP15289 507 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 CLCN1P35523 988 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 POLR2FP61218 127 aaKnown RBP17.18■□□□□ 0.34
RARA-209ENST00000579727 SLC7A9P82251 487 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 STILQ15468 1287 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 SNX30Q5VWJ9 437 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 CC2D1AQ6P1N0 951 aaPredicted RBP17.18■□□□□ 0.34
RARA-209ENST00000579727 SLC47A2Q86VL8 602 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 SIX6OS1Q8N1H7 587 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 TMEM105Q8N8V8 129 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 CLEC4CQ8WTT0 213 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 NAA15Q9BXJ9 866 aaKnown RBP17.18■□□□□ 0.34
RARA-209ENST00000579727 NLRC4Q9NPP4 1024 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 HPS4Q9NQG7 708 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 CFAP97Q9P2B7 532 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 SIK3Q9Y2K2 1263 aa17.18■□□□□ 0.34
RARA-209ENST00000579727 TEX33O43247 280 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 MED7O43513 233 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 GABBR2O75899 941 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 ZBED1O96006 694 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 PFKLP17858 780 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 KPNA1P52294 538 aaPredicted RBP17.17■□□□□ 0.34
RARA-209ENST00000579727 YWHAGP61981 247 aaKnown RBP eCLIP17.17■□□□□ 0.34
RARA-209ENST00000579727 UBXN2BQ14CS0 331 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 C10orf120Q5SQS8 335 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 BHLHA9Q7RTU4 235 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 SLC35F5Q8WV83 523 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 ATOH1Q92858 354 aaPredicted RBP17.17■□□□□ 0.34
RARA-209ENST00000579727 WBP2Q969T9 261 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 ZFRQ96KR1 1074 aaKnown RBP17.17■□□□□ 0.34
RARA-209ENST00000579727 MIS12Q9H081 205 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 PLCB1Q9NQ66 1216 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 ST7Q9NRC1 585 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.17■□□□□ 0.34
RARA-209ENST00000579727 DUS2Q9NX74 493 aaKnown RBP17.17■□□□□ 0.34
RARA-209ENST00000579727 CYTH4Q9UIA0 394 aa17.17■□□□□ 0.34
RARA-209ENST00000579727 MTF2Q9Y483 593 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms