RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 TAOK1Q7L7X3 1001 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 PIGZQ86VD9 579 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 OSTM1Q86WC4 334 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CCDC25Q86WR0 208 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 RELL1Q8IUW5 271 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CDKL3Q8IVW4 592 aaPredicted RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 DCP1BQ8IZD4 617 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 ACTL9Q8TC94 416 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 PIK3R5Q8WYR1 880 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CENPIQ92674 756 aaPredicted RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 APBB2Q92870 758 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 FAM149B1Q96BN6 582 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CFAP57Q96MR6 1250 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 SLC9A7Q96T83 725 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CXCL16Q9H2A7 254 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 ELAC1Q9H777 363 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 CNOT10Q9H9A5 744 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 PNPLA8Q9NP80 782 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 TRMT13Q9NUP7 481 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 KLHL11Q9NVR0 708 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CWC15Q9P013 229 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 BCCIPQ9P287 314 aaKnown RBP eCLIP11.61□□□□□ -0.55
SKA2-204ENST00000578519 DNPEPQ9ULA0 475 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 PCDHB8Q9UN66 801 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 SHOC2Q9UQ13 582 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 R3HDM2Q9Y2K5 976 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 A0A1W2PQ45 241 aaPredicted RBP11.6□□□□□ -0.55
SKA2-204ENST00000578519 A0A1W2PQY0 241 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 CASTOR2A6NHX0 329 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 H3BRJ5 948 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 H7C0C1 242 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 M0QZQ0 153 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 RGS16O15492 202 aaPredicted RBP11.6□□□□□ -0.55
SKA2-204ENST00000578519 GRAP2O75791 330 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 SELPP16109 830 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
SKA2-204ENST00000578519 CAPN2P17655 700 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 KLRC2P26717 231 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 ATP5OP48047 213 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 SULT1E1P49888 294 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 FAM189BP81408 668 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 SKOR1P84550 965 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 GPS1Q13098 491 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 XRCC4Q13426 336 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 OASLQ15646 514 aaKnown RBP11.6□□□□□ -0.55
SKA2-204ENST00000578519 C15orf59Q2T9L4 293 aaPredicted RBP11.6□□□□□ -0.55
SKA2-204ENST00000578519 P3H1Q32P28 736 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 NOMO2Q5JPE7 1267 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 KCNT1Q5JUK3 1230 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 EMC10Q5UCC4 262 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 HIBCHQ6NVY1 386 aaPredicted RBP11.6□□□□□ -0.55
SKA2-204ENST00000578519 RHBDF2Q6PJF5 856 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 KDM7AQ6ZMT4 941 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 PPIL6Q8IXY8 311 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 ABI1Q8IZP0 508 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 FUKQ8N0W3 1084 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 CNPY4Q8N129 248 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 SCML4Q8N228 414 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 ZCCHC9Q8N567 271 aaKnown RBP11.6□□□□□ -0.55
SKA2-204ENST00000578519 ARFGAP1Q8N6T3 406 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 GSTCDQ8NEC7 633 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 SEPT8Q92599 483 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 LPPQ93052 612 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 WNT8BQ93098 351 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 SUSD3Q96L08 255 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 CAPS2Q9BXY5 557 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 POPDC2Q9HBU9 364 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 MIOSQ9NXC5 875 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 PAK5Q9P286 719 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 LRFN2Q9ULH4 789 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 INPP5FQ9Y2H2 1132 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 NEU2Q9Y3R4 380 aa11.6□□□□□ -0.55
SKA2-204ENST00000578519 HACD1B0YJ81 288 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 C9IYK1 514 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 H0YGN5 161 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TMEM189-UBE2V1I3L0A0 370 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 DNM1LO00429 736 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 PIK3R2O00459 728 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 RASGRF2O14827 1237 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 RIPK2O43353 540 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 STK10O94804 968 aaKnown RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 TTC4O95801 387 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 AGTP01019 485 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 POMCP01189 267 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 IFNB1P01574 187 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 RBP3P10745 1247 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TCF4P15884 667 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TSHRP16473 764 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 NR1D1P20393 614 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 IVDP26440 423 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 PHBP35232 272 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 TKTL1P51854 596 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 ARL4CP56559 192 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 MAP3K7CLP57077 242 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 DYNLT1P63172 113 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 RNASELQ05823 741 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms