RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RNF217Q8TC41 542 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 SLC2A14Q8TDB8 520 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 RIN2Q8WYP3 895 aaPredicted RBP8.46□□□□□ -1.06
COPS3-215ENST00000578317 HSFY1Q96LI6 401 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 CEP295NLQ96MC4 621 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 B3GNT5Q9BYG0 378 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 PDCL3Q9H2J4 239 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 PNPLA8Q9NP80 782 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 ATP13A2Q9NQ11 1180 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 LUC7LQ9NQ29 371 aaKnown RBP8.46□□□□□ -1.06
COPS3-215ENST00000578317 HESX1Q9UBX0 185 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.46□□□□□ -1.06
COPS3-215ENST00000578317 SCN1AP35498 2009 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 ANKRD62A6NC57 917 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 ARHGEF15O94989 841 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 CXCL14O95715 111 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 CALCAP01258 141 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 FTLP02792 175 aaPredicted RBP8.45□□□□□ -1.06
COPS3-215ENST00000578317 MMP8P22894 467 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 MAGEA1P43355 309 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 GABRB2P47870 512 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 BCAT1P54687 386 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 SNX16P57768 344 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 PSMC1P62191 440 aaKnown RBP8.45□□□□□ -1.06
COPS3-215ENST00000578317 BST2Q10589 180 aaKnown RBP8.45□□□□□ -1.06
COPS3-215ENST00000578317 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 PTPN14Q15678 1187 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 PSMD5Q16401 504 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 MDH1BQ5I0G3 518 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 RTL10Q7L3V2 364 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 TMEM110Q86TL2 294 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 TTC30AQ86WT1 665 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 PALB2Q86YC2 1186 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 TXLNBQ8N3L3 684 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 KIAA1524Q8TCG1 905 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 SPPL2BQ8TCT7 592 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 POF1BQ8WVV4 589 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 KCTD13Q8WZ19 329 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 B3GALT6Q96L58 329 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 NOX5Q96PH1 765 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 TMEM209Q96SK2 561 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 MIS12Q9H081 205 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 LMAN2LQ9H0V9 348 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 SLC28A3Q9HAS3 691 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 POLMQ9NP87 494 aaPredicted RBP8.45□□□□□ -1.06
COPS3-215ENST00000578317 FAM49BQ9NUQ9 324 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 SPTLC3Q9NUV7 552 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 TMLHEQ9NVH6 421 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 AFF4Q9UHB7 1163 aaKnown RBP8.45□□□□□ -1.06
COPS3-215ENST00000578317 REXO2Q9Y3B8 237 aaKnown RBP8.45□□□□□ -1.06
COPS3-215ENST00000578317 PCDHB5Q9Y5E4 795 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 PCDHA13Q9Y5I0 950 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 TRIP11Q15643 1979 aa8.45□□□□□ -1.06
COPS3-215ENST00000578317 FNDC1Q4ZHG4 1894 aaPredicted RBP8.45□□□□□ -1.06
COPS3-215ENST00000578317 PTPRSQ13332 1948 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 BTNL10A8MVZ5 291 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 TGFBR3LH3BV60 316 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 FSCN2O14926 492 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 XPO1O14980 1071 aaKnown RBP8.44□□□□□ -1.06
COPS3-215ENST00000578317 PJA2O43164 708 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 ZSCAN12O43309 604 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 H2AFZP0C0S5 128 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 CCDC175P0C221 793 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 FAM200BP0CF97 657 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 MYBL1P10243 752 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 CCDC130P13994 396 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 ATF2P15336 505 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 OR1D2P34982 312 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 ACADSBP45954 432 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 NDUFV1P49821 464 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 ERVFC1P60507 584 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 CYP27A1Q02318 531 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 PTP4A2Q12974 167 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 CAMK1Q14012 370 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 DENND1BQ6P3S1 775 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 LILRA6Q6PI73 481 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 PRSS55Q6UWB4 352 aaPredicted RBP8.44□□□□□ -1.06
COPS3-215ENST00000578317 TOGARAM2Q6ZUX3 1019 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 H2AFVQ71UI9 128 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 FAM35AQ86V20 835 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 SPATA2LQ8IUW3 424 aaPredicted RBP8.44□□□□□ -1.06
COPS3-215ENST00000578317 MYLPFQ96A32 169 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 SMARCD1Q96GM5 515 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 LPIN3Q9BQK8 851 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 ALG13Q9NP73 1137 aaKnown RBP8.44□□□□□ -1.06
COPS3-215ENST00000578317 TLR9Q9NR96 1032 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 METTL5Q9NRN9 209 aaKnown RBP8.44□□□□□ -1.06
COPS3-215ENST00000578317 ZDHHC3Q9NYG2 299 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 TAS2R14Q9NYV8 317 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 ZKSCAN5Q9Y2L8 839 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 GPC6Q9Y625 555 aaPredicted RBP8.44□□□□□ -1.06
COPS3-215ENST00000578317 CDY1Q9Y6F8 540 aa8.44□□□□□ -1.06
COPS3-215ENST00000578317 PDCD11Q14690 1871 aaKnown RBP8.44□□□□□ -1.06
COPS3-215ENST00000578317 M0QYV0 167 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 CLDN5O00501 218 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 C2CD2LO14523 706 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 GRM6O15303 877 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 TEX28O15482 410 aa8.43□□□□□ -1.06
COPS3-215ENST00000578317 ADAM12O43184 909 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms