RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 PDXDC1Q6P996 788 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 FBXL19Q6PCT2 694 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 UNQ6494/PRO21346Q6UXR6 183 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 ALKAL1Q6UXT8 129 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 BNC2Q6ZN30 1099 aaPredicted RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 CEP68Q76N32 757 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 KBTBD6Q86V97 674 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 WDR5BQ86VZ2 330 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 CATSPER3Q86XQ3 398 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 MFSD6LQ8IWD5 586 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 ZBTB8OSQ8IWT0 167 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 SLFN12Q8IYM2 578 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 TCEAL8Q8IYN2 117 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 DAW1Q8N136 415 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 SPEM1Q8N4L4 309 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 KCT2Q8NC54 265 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 C2CD4AQ8NCU7 369 aaPredicted RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 RNF214Q8ND24 703 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 STKLD1Q8NE28 680 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF461Q8TAF7 563 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 DEPDC1BQ8WUY9 529 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 EZH1Q92800 747 aaPredicted RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF274Q96GC6 653 aaPredicted RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 PLPPR2Q96GM1 343 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 FAM46AQ96IP4 442 aaKnown RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 MEGF10Q96KG7 1140 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 CCDC43Q96MW1 224 aaKnown RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 PGLYRP2Q96PD5 576 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 FANCD2OSQ96PS1 177 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 MTMR9Q96QG7 549 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 UBL7Q96S82 380 aaPredicted RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 TMEM209Q96SK2 561 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 HAPLN2Q9GZV7 340 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 KCNF1Q9H3M0 494 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 TTC12Q9H892 705 aaPredicted RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 TRPV4Q9HBA0 871 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 SSU72Q9NP77 194 aaKnown RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 TRPV5Q9NQA5 729 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 ASAH2Q9NR71 780 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 IGSF5Q9NSI5 407 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 ADAMTS1Q9UHI8 967 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 PCDHA12Q9UN75 941 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 WASF3Q9UPY6 502 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 TIMM13Q9Y5L4 95 aaPredicted RBP4.31□□□□□ -1.72
PTPRM-206ENST00000578093 PCDH15Q96QU1 1955 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 ADAMTS20P59510 1910 aa4.31□□□□□ -1.72
PTPRM-206ENST00000578093 PI4KAP42356 2102 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 PHLPP2Q6ZVD8 1323 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 LNP1A1A4G5 178 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 PRAMEF27A3QJZ7 478 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 OTOL1A6NHN0 477 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 BTBD18B2RXH4 712 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF197O14709 1029 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 SYN3O14994 580 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 DCLK1O15075 740 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 FANCGO15287 622 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 CHADO15335 359 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 GREM1O60565 184 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 JAK2O60674 1132 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 RNGTTO60942 597 aaKnown RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF806P0C7X5 589 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 HARSP12081 509 aaKnown RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ATF6P18850 670 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 CYP11B2P19099 503 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 GARTP22102 1010 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 PROZP22891 400 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 U2AF2P26368 475 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ELF1P32519 619 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 KRT2P35908 639 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 MPLP40238 635 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 RAP1GAPP47736 663 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 GUCY2FP51841 1108 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 KPNA1P52294 538 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 RACK1P63244 317 aaKnown RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 SPAG1Q07617 926 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 MAPK7Q13164 816 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 MAP7Q14244 749 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 LRRC32Q14392 662 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 PPP2R5DQ14738 602 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF568Q3ZCX4 644 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 CTXN3Q4LDR2 81 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 WIPI1Q5MNZ9 446 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 CYP4A22Q5TCH4 519 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 TRIM68Q6AZZ1 485 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 FSTL4Q6MZW2 842 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF280DQ6N043 979 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 LRFN4Q6PJG9 635 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 GAREM2Q75VX8 874 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 RTL10Q7L3V2 364 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 C12orf40Q86WS4 652 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 NECAB1Q8N987 351 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 MCPH1Q8NEM0 835 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 BEST2Q8NFU1 509 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 DEPTORQ8TB45 409 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF507Q8TCN5 953 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 GAB3Q8WWW8 586 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 GATA6Q92908 595 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 NKD1Q969G9 470 aa4.3□□□□□ -1.72
PTPRM-206ENST00000578093 ZBTB45Q96K62 511 aaPredicted RBP4.3□□□□□ -1.72
PTPRM-206ENST00000578093 MYRFLQ96LU7 910 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms